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251. Neural pattern change during encoding of a narrative predicts retrospective duration estimates

Author(s):
Lositsky, Olga; Chen, Janice; Toker, Daniel; Honey, Christopher; Hasson, Uri; Norman, Kenneth
Abstract:
What mechanisms support our ability to estimate durations on the order of minutes? Behavioral studies in humans have shown that changes in contextual features lead to overestimation of past durations. Based on evidence that the medial temporal lobes and prefrontal cortex represent contextual features, we related the degree of fMRI pattern change in these regions with people's subsequent duration estimates. After listening to a radio story in the scanner, participants were asked how much time had elapsed between pairs of clips from the story. Our ROI analysis found that the neural pattern distance between two clips at encoding was correlated with duration estimates in the right entorhinal cortex and right pars orbitalis. Moreover, a whole-brain searchlight analysis revealed a cluster spanning the right anterior temporal lobe. Our findings provide convergent support for the hypothesis that retrospective time judgments are driven by 'drift' in contextual representations supported by these regions.
Type:
Dataset
Issue Date:
12 March 2016

255. Nonlinear growth of magnetic islands by passing fast ions in NSTX

Author(s):
Yang, James; Fredrickson, Eric; Podestà, Mario; Poli, Francesca
Abstract:
The growth of magnetic islands in NSTX is modeled successfully, with the consideration of passing fast ions. It is shown that a good quantitative agreement between simulation and experimental measurement can be achieved when the uncompensated cross-field current induced by passing fast ions is included in the island growth model. The fast ion parameters, along with other equilibrium parameters, are obtained self-consistently using the TRANSP code with the assumptions of the ‘kick’ model (Podestà et al 2017 Plasma Phys. Control. Fusion 59 095008). The results show that fast ions can contribute to overcoming the stabilizing effect of polarization current for magnetic island growth.
Type:
Dataset
Issue Date:
2022

262. Observation of a reduced-turbulence regime with boron powder injection in a stellarator

Author(s):
Nespoli, Federico; Masuzaki, Suguru; Tanaka, Kenji; Ashikawa, Naoko; Shoji, Mamoru; Gilson, Erik; Oishi, Tetsutarou; Ida, Katsumi; Yoshinuma, Mikirou; Takemura, Yuki; Kinoshita, Toshiki; Motojima, Gen; Kenmochi, Naoki; Kawamura, Gakushi; Suzuki, Chihiro; Nagy, Alex; Bortolon, Alessandro; Pablant, Novimir; Mollén, Albert; Tamura, Naoki; Gates, David; Morisaki, Tomohiro
Type:
Dataset
Issue Date:
2022

267. Optimization of the angular orientation for a fast ion loss detector in a tokamak

Author(s):
Darrow, D.
Abstract:
A scintillator type fast ion loss detector measures the gyroradius and pitch angle distribution of superthermal ions escaping from a magnetically confined fusion plasma at a single location. Described here is a technique for optimizing the angular orientation of such a detector in an axisymmetric tokamak geometry in order to intercept losses over a useful and interesting ranges of pitch angle. The method consists of evaluating the detector acceptance as a function of the fast ion constants of motion, i.e. energy, canonical toroidal momentum, and magnetic moment. The detector acceptance can then be plotted in a plane of constant energy and compared with the relevant orbit class boundaries and fast ion source distributions. Knowledge of expected or interesting mechanisms of loss can further guide selection of the detector orientation. The example of a fast ion loss detector for the National Spherical Torus Experiment-Upgrade (NSTX-U) is considered.
Type:
Dataset
Issue Date:
January 2017

268. Overview of NSTX Upgrade Initial Results and Modelling Highlights

Author(s):
Menard, J.E.; Allain, J.P.; Battaglia, D.J.; Bedoya, F.; Bell, R.E.; Belova, E.; Berkery, J.W.; Boyer, M.D.; Crocker, N.; Diallo, A.; Ebrahimi, F.; Ferrraro, N.; Fredrickson, E.; Frerichs, H.; Gerhardt, S.; Gorelenkov, N.; Guttenfelder, W.; Heidbrink, W.; Kaita, R.; Kaye, S.M.; Kriete, D.M.; Kubota, S.; LeBlanc, B.P.; Liu, D.; Lunsford, R.; Mueller, D.; Myers, C.E.; Ono, M.; Park, J.-K.; Podesta, M.; Raman, R.; Reinke, M.; Ren, Y.; Sabbagh, S.A.; Schmitz, O.; Scotti, F.; Sechrest, Y.; Skinner, C.H.; Smith, D.R.; Soukhanovskii, V.; Stoltzfus-Dueck, T.; Yuh, H.; Wang, Z.; Waters, I.; Ahn, J.-W.; Andre, R.; Barchfeld, R.; Beiersdorfer, P.; Bertelli, N.; Bhattacharjee, A.; Boyle, D.; Brennan, D.; Buttery, R.; Capece, A.; Canal, G.; Canik, J.; Chang, C.S.; Darrow, D.; Delgado-Aparicio, L.; Domier, C.; Ethier, S.; Evans, T.; Ferron, J.; Finkenthal, M.; Fonck, R.; Gan, K.; Gates, D.; Goumiri, I.; Gray, T.; Hosea, J.; Humphreys, D.; Jarboe, T.; Jardin, S.; Jaworski, M.A.; Koel, B.; Kolemen, E.; Ku, S.; LaHaye, R.J.; Levinton, F.; Luhmann Jr., N.; Maingi, R.; Maqueda, R.; McKee, G.; Meier, E.; Myra, J.; Perkins, R.; Poli, F.; Rhodes, T.; Riquezes, J.; Rowley, C.; Russell, D.; Schuster, E.; Stratton, B.; Stutman, D.; Taylor, G.; Tritz, K.; Wang, W.; Wirth, B.; Zweben, S.J.
Abstract:
The National Spherical Torus Experiment (NSTX) has undergone a major upgrade, and the NSTX Upgrade (NSTX-U) Project was completed in the summer of 2015. NSTX-U first plasma was subsequently achieved, diagnostic and control systems have been commissioned, H-Mode accessed, magnetic error fields identified and mitigated, and the first physics research campaign carried out. During 10 run weeks of operation, NSTX-U surpassed NSTX-record pulse-durations and toroidal fields, and high-performance ~1MA H-mode plasmas comparable to the best of NSTX have been sustained near and slightly above the n=1 no-wall stability limit and with H-mode confinement multiplier H98y2 above 1. Transport and turbulence studies in L-mode plasmas have identified the coexistence of at least two ion-gyro-scale turbulent micro-instabilities near the same radial location but propagating in opposite (i.e. ion and electron diamagnetic) directions. These modes have the characteristics of ion-temperature gradient and micro-tearing modes, respectively, and the role of these modes in contributing to thermal transport is under active investigation. The new second more tangential neutral beam injection was observed to significantly modify the stability of two types of Alfven Eigenmodes. Improvements in offline disruption forecasting were made in the areas of identification of rotating MHD modes and other macroscopic instabilities using the Disruption Event Characterization and Forecasting (DECAF) code. Lastly, the Materials Analysis and Particle Probe (MAPP) was utilized on NSTX-U for the first time and enabled assessments of the correlation between boronized wall conditions and plasma performance. These and other highlights from the first run campaign of NSTX-U are described.
Type:
Dataset
Issue Date:
October 2017

270. Parametric dependencies of resonant layer responses across linear, two-fluid, drift-MHD regimes

Author(s):
Park, Jong-Kyu
Abstract:
Non-axisymmetric magnetic fields arising in a tokamak either by external or internal perturbations can induce complex non-ideal MHD responses in their resonant surfaces while remaining ideally evolved elsewhere. This layer response can be characterized in a linear regime by a single parameter called the inner-layer Delta, which enables outer-layer matching and the prediction of torque balance to non-linear island regimes. Here, we follow strictly one of the most comprehensive analytic treatments including two-fluid and drift MHD effects and keep the fidelity of the formulation by incorporating the numerical method based on the Riccati transformation when quantifying the inner-layer Delta. The proposed scheme reproduces not only the predicted responses in essentially all asymptotic regimes but also with continuous transitions as well as improved accuracies. In particular, the Delta variations across the inertial regimes with viscous or semi-collisional effects have been further resolved, in comparison with additional analytic solutions. The results imply greater shielding of the electromagnetic torque at the layer than what would be expected by earlier work when the viscous or semi-collisional effects can compete against the inertial effects, and also due to the intermediate regulation by kinetic Alfven wave resonances as rotation slows down. These are important features that can alter the nonaxisymmetric plasma responses including the field penetration by external fields or island seeding process in rotating tokamak plasmas.
Type:
Dataset
Issue Date:
26 July 2022

273. Physics design for a lithium vapor box divertor experiment on Magnum-PSI

Author(s):
Schwartz, Jacob; Emdee, Eric; Goldston, Robert; Jaworski, Michael
Abstract:
The lithium vapor box divertor is a potential solution for power exhaust in toroidal confinement devices. The divertor plasma interacts with a localized, dense cloud of lithium vapor, leading to volumetric radiation, cooling, recombination, and detachment. To minimize contamination of the core plasma, lithium vapor is condensed on cool (300°C to 400°C) baffles upstream of the detachment point. Before implementing this in a toroidal plasma device with a slot divertor geometry, we consider an experiment with a scaled baffled-pipe geometry in the high-power linear plasma device Magnum-PSI. Three 15 cm-scale open cylinders joined by 6 cm diameter ‘nozzles’ are positioned on the plasma beam axis upstream of a target. The central box may be loaded with several tens of grams of lithium, which can be evaporated at 650°C to produce a vapor predicted, using a simple plasma-neutral interaction model, to be dense enough to cause volumetric detachment in the plasma. The power delivered to the target and box walls as measured by increases in their temperatures after a 10 s plasma pulse can be compared to determine the effectiveness of the vapor in detaching the plasma. Direct Simulation Monte Carlo simulations are performed to estimate the flow rates of lithium vapor between the boxes and to estimate the trapping of H2 delivered by the plasma in the boxes, which could inadvertently lead to detachment. Details of the geometry, simulations, and possible diagnostic techniques are presented.
Type:
Dataset
Issue Date:
30 January 2019

274. Plasma Facing Components with Capillary Porous System and Liquid Metal Coolant Flow

Author(s):
Khodak, Andrei; Maingi, Rajesh
Abstract:
Liquid metal can create a renewable protective surface on plasma facing components (PFC), with an additional advantage of deuterium pumping and the prospect of tritium extraction if liquid lithium (LL) is used and maintained below 450 C, the temperature above which LL vapor pressure begins to contaminate the plasma. LM can also be utilized as an efficient coolant, driven by the Lorentz force created with the help of the magnetic field in fusion devices. Capillary porous systems can serve as a conduit of LM and simultaneously provide stabilization of the LM flow, protecting against spills into the plasma. Recently a combination of a fast-flowing LM cooling system with a porous plasma facing wall (CPSF) was investigated [Khodak and Maingi (2021)]. The system takes an advantage of a magnetohydrodynamics velocity profile, as well as attractive LM properties to promote efficient heat transfer from the plasma to the LL at low pumping energy cost, relative to the incident heat flux on the PFC. In case of a disruption leading to excessive heat flux from the plasma to the LM PFCs, LL evaporation can stabilize the PFC surface temperature, due to high evaporation heat and apparent vapor shielding. The proposed CPSF was optimized analytically for the conditions of a Fusion Nuclear Science Facility [Kessel et al. (2019)]: 10T toroidal field and 10 MW/m2 peak incident heat flux. Computational fluid dynamics analysis confirmed that a CPSF system with 2.5 mm square channels can pump enough LL so that no additional coolant is needed.
Type:
Dataset and Image
Issue Date:
2021

275. Plasma boundary shape control and real-time equilibrium reconstruction on NSTX-U

Author(s):
Boyer, M.; Battaglia, D.; Mueller, D.; Eidietis, N.; Erickson, K.; Ferron, J.; Gates, D.; Gerhardt, S.; Johnson, R.; Kolemen, E.; Menard, J.; Myers, C.; Sabbagh, S.; Scotti, F.; Vail, P.
Abstract:
The upgrade to the National Spherical Torus eXperiment (NSTX-U) included two main improvements: a larger center-stack, enabling higher toroidal field and longer pulse duration, and the addition of three new tangentially aimed neutral beam sources, which increase available heating and current drive, and allow for flexibility in shaping power, torque, current, and particle deposition profiles. To best use these new capabilities and meet the high-performance operational goals of NSTX-U, major upgrades to the NSTX-U Control System (NCS) hardware and software have been made. Several control algorithms, including those used for real-time equilibrium reconstruction and shape control, have been upgraded to improve and extend plasma control capabilities. As part of the commissioning phase of first plasma operations, the shape control system was tuned to control the boundary in both inner-wall limited and diverted discharges. It has been used to accurately track the requested evolution of the boundary (including the size of the inner gap between the plasma and central solenoid, which is a challenge for the ST configuration), X-point locations, and strike point locations, enabling repeatable discharge evolutions for scenario development and diagnostic commissioning.
Type:
Dataset
Issue Date:
March 2018

278. Prediction of electron density and pressure profile shapes on NSTX-U using neural networks

Author(s):
Boyer, Mark; Chadwick, Jason
Abstract:
A new model for prediction of electron density and pressure profile shapes on NSTX and NSTX-U has been developed using neural networks. The model has been trained and tested on measured profiles from experimental discharges during the first operational campaign of NSTX-U. By projecting profiles onto empirically derived basis functions, the model is able to efficiently and accurately reproduce profile shapes. In order to project the performance of the model to upcoming NSTX-U operations, a large database of profiles from the operation of NSTX is used to test performance as a function of available data. The rapid execution time of the model is well suited to the planned applications, including optimization during scenario development activities, and real-time plasma control. A potential application of the model to real-time profile estimation is demonstrated.
Type:
Dataset
Issue Date:
February 2021

279. Princeton Dynamic Stall Database: Upward ramp-type pitching motions

Author(s):
Kiefer, Janik; Brunner, Claudia E.; Hansen, Martin O. L.; Hultmark, Marcus
Abstract:
This data set contains data of a NACA 0021 airfoil as it undergoes upward ramp-type pitching motions at high Reynolds numbers and low Mach numbers. The parametric study covers a wide range of chord Reynolds numbers, reduced frequencies and pitching geometries characterized by varying mean angle and angle amplitude. The data were acquired in the High Reynolds number Test Facility at Princeton University, which is a closed-loop wind tunnel that can be pressurized up to 23 MPa and allowed for variation of the chord Reynolds number over a range of 5.0 × 10^5 ≤ Re_c ≤ 5.5 × 10^6. Data were acquired using 32 pressure taps along the surface of the airfoil. The data are the phase-averaged results of 150 individual half-cycles for any given test case.
Type:
Dataset
Issue Date:
6 July 2022

280. Princeton Open Ventilation Monitor

Author(s):
Bourrianne, Philippe; Chidzik, Stanley; Cohen, Daniel; Elmer, Peter; Hallowell, Thomas; Kilbaugh, Todd J.; Lange, David; Leifer, Andrew M.; Marlow, Daniel R.; Meyers, Peter D.; Normand, Edna; Nunes, Janine; Oh, Myungchul; Page, Lyman; Periera, Talmo; Pivarski, Jim; Schreiner, Henry; Stone, Howard A.; Tank, David W.; Thiberge, Stephan; Tully, Christopher
Abstract:
The detailed information on the design and construction of the Princeton Open Ventilation Monitor device and software are contained in this data repository. This information consists of the electrical design files, mechanical design files, bill of materials, human subject recording and analysis code, and a copy of the code repository for operating the patient monitors and central station.
Type:
Dataset, Software, and Image
Issue Date:
22 November 2021

283. Quantitative imaging of carbon dimer precursor for nanomaterial synthesis in the carbon arc

Author(s):
Vekselman, V.; Khrabry, A.; Kaganovich, I.; Stratton, B.; Selinsky, R. S.; Raitses, Y.
Abstract:
Delineating the dominant processes responsible for nanomaterial synthesis in a plasma environment requires measurements of the precursor species contributing to the growth of nanostructures. We performed comprehensive measurements of spatial and temporal profiles of carbon dimers in sub-atmospheric-pressure carbon arc by laser-induced fluorescence. Measured spatial profiles of carbon dimers coincide with the growth region of carbon nanotubes (Fang et al 2016 Carbon 107 273-80) and vary depending on the arc operation mode, which is determined by the discharge current and the ablation rate of the graphite anode. The carbon dimer density profile exhibits large spatial and time variations due to motion of the arc core. A comparison of the experimental data with the 2D simulation results of self-consistent arc modeling shows a good agreement. The model predicts well the main processes determining spatial profiles of carbon dimers.
Type:
Dataset
Issue Date:
January 2018

285. Quasi-static and dynamic magnetic tension forces in arched, line-tied magnetic flux ropes

Author(s):
Myers, Clayton; Yamada, Masaaki; Ji, Hantao; Yoo, Jongsoo; Jara-Almonte, Jonathan; Fox, William
Abstract:
Solar eruptions are often driven by magnetohydrodynamic instabilities such as the torus and kink instabilities that act on line-tied magnetic flux ropes. Recent laboratory experiments designed to study these eruptive instabilities have demonstrated the key role of both dynamic (Myers et al 2015 Nature 528, 526) and quasi-static (Myers et al 2016 Phys. Plasmas, in press) magnetic tension forces in contributing to the equilibrium and stability of line-tied magnetic flux ropes. In this paper, we synthesize these laboratory results and explore the relationship between the dynamic and quasi-static tension forces. While the quasi-static tension force is found to contribute to the flux rope equilibrium in a number of regimes, the dynamic tension force is substantial mostly in the so-called failed torus regime where magnetic self-organization events prevent the flux rope from erupting.
Type:
Dataset
Issue Date:
December 2016

288. Raw Data for GrsA Sub-domain Dynamics

Author(s):
Sun, Xun; Alfermann, Jonas; Li, Hao; Watkins, Maxwell B.; Chen, Yi-Tsao; Chu, Jhih-Wei; Ando, Nozomi
Abstract:
This repository contains the raw photon-by-photon single-molecule FRET (smFRET) trajectories, SAXS data, and MD simulation trajectories, multi-sequence alignment, and gel images for the paper titled "Sub-Domain Dynamics Enables Chemical Chain Reactions in Nonribosomal Peptide Synthetases."
Type:
Dataset
Issue Date:
2 August 2023

291. Reduced Model for Direct Induction Startup Scenario Development on MAST-U and NSTX-U

Author(s):
Battaglia, D.J.; Thornton, A.J.; Gerhardt, S.P.; Kirk, A.; Kogan, L; Menard, J.E.
Abstract:
A reduced semi-empirical model using time-dependent axisymmetric vacuum field calculations is used to develop the prefill and feed-forward coil current targets required for reliable direct induction (DI) startup on the new MA-class spherical tokamaks, MAST-U and NSTX-U. The calculations are constrained by operational limits unique to each device, such as the geometry of the conductive elements and active coils, power supply specifications and coil heating and stress limits. The calculations are also constrained by semi-empirical models for sufficient breakdown, current drive, equilibrium and stability of the plasma developed from a shared database. A large database of DI startup on NSTX and NSTX-U is leveraged to quantify the requirements for achieving a reliable breakdown (Ip ~ 20 kA). It is observed that without pre-ionization, STs access the large E/P regime at modest loop voltage (Vloop) where the electrons in the weakly ionized plasma are continually accelerating along the open field lines. This ensures a rapid (order millisecond) breakdown of the neutral gas, even without pre-ionization or high-quality field nulls. The timescale of the initial increase in Ip on NSTX is reproduced in the reduced model provided a mechanism for impeding the applied electric field is included. Most discharges that fail in the startup phase are due to an inconsistency in the evolution of the plasma current (Ip) and equilibrium field or loss of vertical stability during the burn-through phase. The requirements for the self-consistent evolution of the fields in the weakly and full-ionized plasma states are derived from demonstrated DI startup on NSTX, NSTX-U and MAST. The predictive calculations completed for MAST-U and NSTX-U illustrate that the maximum Ip ramp rate (dIp/dt) in the early startup phase is limited by the voltage limits on the poloidal field coils on MAST-U and passive vertical stability on NSTX-U.
Type:
Dataset
Issue Date:
August 2019

295. Regional hydroclimatic variability due to contemporary deforestation in southern Amazonia and associated boundary layer characteristics

Author(s):
Khanna, Jaya; Medvigy, David; Fisch, Gilberto; Neves, Theomar Trindade de Araújo Tiburtino
Abstract:
Amazonian deforestation causes systematic changes in regional dry season precipitation. Some of these changes at contemporary large scales (a few hundreds of kilometers) of deforestation have been associated with a ‘dynamical mesoscale circulation’, induced by the replacement of rough forest with smooth pasture. In terms of decadal averages, this dynamical mechanism yields increased precipitation in downwind regions and decreased precipitation in upwind regions of deforested areas. Daily, seasonal, and interannual variations in this phenomenon may exist, but have not yet been identified or explained. This study uses observations and numerical simulations to develop relationships between the dynamical mechanism and the local- and continental-scale atmospheric conditions across a range of time scales. It is found that the strength of the dynamical mechanism is primarily controlled by the regional-scale thermal and dynamical conditions of the boundary layer, and not by the continental- and global-scale atmospheric state. Lifting condensation level and wind speed within the boundary layer have large and positive correlations with the strength of the dynamical mechanism. The strength of these relationships depends on time scale and is strongest over the seasonal cycle. Overall, the dynamical mechanism is found to be strongest during times when the atmosphere is relatively stable. Hence, for contemporary large scales of deforestation this phenomenon is found to be the prevalent convective triggering mechanism during the dry and parts of transition seasons (especially during the dry-to-wet transition), significantly affecting the hydroclimate during this period.
Type:
Dataset and Software
Issue Date:
2018

296. Regulation of Harvester Ant Foraging as a Closed-Loop Excitable System

Abstract:
Ant colonies regulate activity in response to changing conditions without using centralized control. Harvester ant colonies forage in the desert for seeds, and their regulation of foraging manages a tradeoff between spending and obtaining water. Foragers lose water while outside in the dry air, but the colony obtains water by metabolizing the fats in the seeds they eat. Previous work shows that the rate at which an outgoing forager leaves the nest depends on its recent experience of brief antennal contact with returning foragers that carry a seed. We examine how this process can yield foraging rates that are robust to uncertainty and responsive to temperature and humidity across minutes to hour-long timescales. To explore possible mechanisms, we develop a low-dimensional analytical model with a small number of parameters that captures observed foraging behavior. The model uses excitability dynamics to represent response to interactions inside the nest and a random delay distribution to represent foraging time outside the nest. We show how feedback of outgoing foragers returning to the nest stabilizes the incoming and outgoing foraging rates to a common value determined by the ``volatility’’ of available foragers. The model exhibits a critical volatility above which there is sustained foraging at a constant rate and below which there is cessation of foraging. To explain how the foraging rates of colonies adjust to temperature and humidity, we propose a mechanism that relies on foragers modifying their volatility after they leave the nest and get exposed to the environment. Our study highlights the importance of feedback in the regulation of foraging activity and points to modulation of volatility as a key to explaining differences in foraging activity in response to conditions and across colonies. Our results present opportunities for generalization to other contexts and systems with excitability and feedback across multiple timescales.
Type:
collection and Dataset

297. Remote-sensing gas measurements with coherent Rayleigh-Brillouin scattering

Author(s):
Gerakis, A.; Shneider, M. N.; Stratton, B. C.
Abstract:
We measure the coherent Rayleigh-Brillouin scattering (CRBS) signal integral as a function of the recorded gas pressure in He, Co2, SF6, and air, and we confirm the already established quadratic dependence of the signal on the gas density. We propose the use of CRBS as an effective diagnostic for the remote measurement of gas’ density (pressure) and temperature, as well as polarizability, for gases of known composition.
Type:
Dataset
Issue Date:
2016