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281. Data for: Three-Dimensional Morphometry of Ooids in Oolites: a new tool for more accurate and precise paleoenvironmental interpretation

Author(s):
Howes, Bolton; Mehra, Akshay; Maloof, Adam
Abstract:
The prevalence of ooids in the stratigraphic record, and their association with shallow-water carbonate environments, make ooids an important paleoenvironmental indicator. Recent advances in the theoretical understanding of ooid morphology, along with empirical studies from Turks and Caicos, Great Salt Lake, and The Bahamas, have demonstrated that the morphology of ooids is indicative of depositional environment and hydraulic conditions. To apply this knowledge from modern environments to the stratigraphic record of Earth history, researchers measure the size and shape of lithified ooids on two-dimensional surfaces (i.e., thin sections or polished slabs), often assuming that random 2D slices intersect the nuclei and that the orientation of the ooids is known. Here we demonstrate that these assumptions rarely are true, resulting in errors of up to 35% on metrics like major axis length. We present a method for making 3D reconstructions by serial grinding and imaging, which enables accurate measurement of the morphology of individual ooids within an oolite, as well as the sorting and porosity of a sample. We also provide three case studies that use the morphology of ooids in oolites to extract environmental information. Each case study demonstrates that 2D measurements can be useful if the environmental signal is large relative to the error from 2D measurements. However, 3D measurements substantially improve the accuracy and precision of environmental interpretations. This study focuses on oolites, but errors from 2D measurements are not unique to oolites; this method can be used to extract accurate grain and porosity measurements from any lithified granular sample.
Type:
Dataset
Issue Date:
22 February 2021

282. Multi-Fluid and Kinetic Models of Partially Ionized Magnetic Reconnection

Author(s):
Jara-Almonte, J.; Murphy, N.A.; Ji, H.
Abstract:
Magnetic reconnection in partially ionized plasmas is a ubiquitous and important phenomena in both laboratory and astrophysical systems. Here, simulations of partially ionized magnetic reconnection with well-matched initial conditions are performed using both multi-fluid and fully-kinetic approaches. Despite similar initial conditions, the time-dependent evolution differs between the two models. In multi-fluid models, the reconnection rate locally obeys either a decoupled Sweet-Parker scaling, where neutrals are unimportant, or a fully coupled Sweet-Parker scaling, where neutrals and ions are strongly coupled, depending on the resistivity. In contrast, kinetic models show a faster reconnection rate that is proportional to the fully-coupled, bulk Alfv\'en speed, $v_A^\star$. These differences are interpreted as the result of operating in different collisional regimes. Multi-fluid simulations are found to maintain $\nu_{ni}L/v_A^\star \gtrsim 1$, where $\nu_{ni}$ is the neutral-ion collision frequency and $L$ is the time-dependent current sheet half-length. This strongly couples neutrals to the reconnection outflow, while kinetic simulations evolve to allow $\nu_{ni}L/v_A^\star < 1$, decoupling neutrals from the reconnection outflow. Differences in the way reconnection is triggered may explain these discrepancies.
Type:
Dataset
Issue Date:
2021

283. Electromagnetic Particle Injector for Fast Time Response Disruption Mitigation in Tokamaks

Author(s):
Raman, R.; Lay, W.-S.; Jarboe, T.R.; Menard, J.E.; Ono, M.
Abstract:
A novel, rapid time-response, disruption mitigation system referred to as the Electromagnetic Particle Injector (EPI) is described. This method can accurately deliver the radiative payload to the plasma center on a <10 ms time scale, much faster, and deeper, than what can be achieved using conventional methods. The EPI system accelerates a sabot electromagnetically. The sabot is a metallic capsule that can be accelerated to desired velocities by an electromagnetic impeller. At the end of its acceleration, within 2 ms, the sabot will release a radiative payload, which is composed of low-z granules, or a shell pellet containing smaller pellets. The primary advantage of the EPI concept over gas propelled systems is its potential to meet short warning time scales, while accurately delivering the required particle size and materials at the velocities needed for achieving the required penetration depth in high power ITER-scale discharges for thermal and runaway current disruption mitigation. The present experimental tests from a prototype system have demonstrated the acceleration of a 3.2 g sabot to over 150 m/s within 1.5 ms, consistent with the calculations, giving some degree of confidence that larger ITER-scale injector can be developed.
Type:
Dataset
Issue Date:
November 2018

284. Sensitivity of WallDYN material migration modeling to uncertainties in mixed-material surface binding energies

Author(s):
Nichols, J.H.; Jaworski, M.A.; Schmid, K.
Abstract:
The WallDYN package has recently been applied to a number of tokamaks to self-consistently model the evolution of mixed-material plasma facing surfaces. A key component of the WallDYN model is the concentration-dependent surface sputtering rate, calculated using SDTRIM.SP. This modeled sputtering rate is strongly influenced by the surface binding energies (SBEs) of the constituent materials, which are well known for pure elements but often are poorly constrained for mixed-materials. This work examines the sensitivity of WallDYN surface evolution calculations to different models for mixed-material SBEs, focusing on the carbon/lithium/oxygen/deuterium system present in NSTX. A realistic plasma background is reconstructed from a high density, H-mode NSTX discharge, featuring an attached outer strike point with local density and temperature of 4e20 m^-3 and 4 eV, respectively. It is found that various mixed-material SBE models lead to significant qualitative and quantitative changes in the surface evolution profile at the outer divertor, with the highest leverage parameter being the C-Li binding model. Uncertainties of order 50%, appearing on time scales relevant to tokamak experiments, highlight the importance of choosing an appropriate mixed-material sputtering representation when modeling the surface evolution of plasma facing components. These results are generalized to other fusion-relevant materials with different ranges of SBEs.
Type:
Dataset
Issue Date:
2017

286. Coupling between Alfven wave and Kelvin-Helmholtz waves in the low latitude boundary layer

Author(s):
Kim, Eun-Hwa; Johnson, Jay; Nykyri, Katariina
Abstract:
The Kelvin-Helmholtz (KH) instability of magnetohydrodynamic surface waves at the low latitude boundary layer is examined using both an eigenfrequency analysis and a time-dependent wave simulation. The analysis includes the effects of sheared flow and Alfven velocity gradient. When the magnetosheath flows are perpendicular to the ambient magnetic field direction, unstable KH waves that propagate obliquely to the sheared flow direction occur at the sheared flow surface when the Alfv\'en Mach number is higher than an instability threshold. Including a shear transition layer between the magnetosphere and magnetosheath leads to secondary KH waves (driven by the sheared flow) that are coupled to the resonant surface Alfven wave. There are remarkable differences between the primary and the secondary KH waves including wave frequency, the growth rate, and the ratio between transverse and the compressional component. The secondary KH wave energy is concentrated near the shear Alfven wave frequency at the magnetosheath with a lower frequency than the primary KH waves. Although the growth rate of the secondary KH waves is lower than the primary KH waves, the threshold condition is lower, so it is expected that these types of waves will dominate at lower Mach number. Because the transverse component of the secondary KH waves is stronger than the primary KH waves, more efficient wave energy transfer from the boundary layer to the inner magnetosphere is also predicted.
Type:
Dataset
Issue Date:
December 2021

287. Electron inertial effects on linearly polarized electromagnetic ion cyclotron waves at Earth's magnetosphere

Author(s):
Kim, Eun-Hwa; Johnson, Jay; Lee, Dong-Hun
Abstract:
We discuss a role of the electron inertial effect on linearly polarized electromagnetic ion cyclotron (EMIC) waves at Earth. The linearly polarized EMIC waves have been previously suggested to be generated via mode conversion from the fast compressional wave at the ion-ion hybrid (IIH) resonance. When the electron inertial effects are neglected, the wave normal angle of the mode-converted IIH waves is 90 degrees because the wavevector perpendicular to the magnetic field becomes infinite at the IIH resonance. When the electron inertial effect is considered, the mode-converted IIH waves can propagate across the magnetic field lines and the wavelength perpendicular to the magnetic field approaches the electron inertial length scale near the Buchsbaum resonance. These waves are referred to as electron inertial waves. Due to the electron inertial effect, the perpendicular wavenumber to the ambient magnetic field near the IIH resonance remains finite and the wave normal angle is less than 90 degrees. The wave normal angle where the maximum absorption occurs in a dipole magnetic field is 30-80 degrees, which is consistent with the observed values near the magnetic equator. Therefore, the numerical results suggest that the linearly polarized EMIC wave generated via mode conversion near the IIH resonance can be detected in between the Buchsbaum and the IIH resonance frequencies, and these waves can have normal angle less than 90 degrees.
Type:
Dataset
Issue Date:
April 2019

288. Quasioptical modeling of wave beams with and without mode conversion: II. Numerical simulations of single-mode beams

Author(s):
K. Yanagihara, I. Y. Dodin, and S. Kubo
Abstract:
This work continues a series of papers where we propose an algorithm for quasioptical modeling of electromagnetic beams with and without mode conversion. The general theory was reported in the first paper of this series, where a parabolic partial differential equation was derived for the field envelope that may contain one or multiple modes with close group velocities. Here, we present a corresponding code PARADE (PAraxial RAy DEscription) and its test applications to single-mode beams in vacuum and also in inhomogeneous magnetized plasma. The numerical results are compared, respectively, with analytic formulas from Gaussian-beam optics and also with cold-plasma ray tracing. Quasioptical simulations of mode-converting beams are reported in the next, third paper of this series.
Type:
Dataset
Issue Date:
August 2019

289. Quasioptical modeling of wave beams with and without mode conversion: III. Numerical simulations of mode-converting beams

Author(s):
K. Yanagihara, I. Y. Dodin, and S. Kubo
Abstract:
This work continues a series of papers where we propose an algorithm for quasioptical modeling of electromagnetic beams with and without mode conversion. The general theory was reported in the first paper of this series, where a parabolic partial differential equation was derived for the field envelope that may contain one or multiple modes with close group velocities. In the second paper, we presented a corresponding code PARADE (PAraxial RAy DEscription) and its test applications to single-mode beams. Here, we report quasioptical simulations of mode-converting beams for the first time. We also demonstrate that PARADE can model splitting of two-mode beams. The numerical results produced by PARADE show good agreement with those of one-dimensional full-wave simulations and also with conventional ray tracing (to the extent that one-dimensional and ray-tracing simulations are applicable).
Type:
Dataset
Issue Date:
August 2019

290. Quantitative imaging of carbon dimer precursor for nanomaterial synthesis in the carbon arc

Author(s):
Vekselman, V.; Khrabry, A.; Kaganovich, I.; Stratton, B.; Selinsky, R. S.; Raitses, Y.
Abstract:
Delineating the dominant processes responsible for nanomaterial synthesis in a plasma environment requires measurements of the precursor species contributing to the growth of nanostructures. We performed comprehensive measurements of spatial and temporal profiles of carbon dimers in sub-atmospheric-pressure carbon arc by laser-induced fluorescence. Measured spatial profiles of carbon dimers coincide with the growth region of carbon nanotubes (Fang et al 2016 Carbon 107 273-80) and vary depending on the arc operation mode, which is determined by the discharge current and the ablation rate of the graphite anode. The carbon dimer density profile exhibits large spatial and time variations due to motion of the arc core. A comparison of the experimental data with the 2D simulation results of self-consistent arc modeling shows a good agreement. The model predicts well the main processes determining spatial profiles of carbon dimers.
Type:
Dataset
Issue Date:
January 2018

291. Real-time Radiative Divertor Feedback Control Development for the NSTX-U Tokamak using a Vacuum Ultraviolet Spectrometer

Author(s):
Soukhanovskii, V.A.; Kaita, R.; Stratton, B.
Abstract:
A radiative divertor technique is planned for the NSTX-U tokamak to prevent excessive erosion and thermal damage of divertor plasma-facing components in H-mode plasma discharges with auxiliary heating up to 12 MW. In the radiative (partially detached) divertor, extrinsically seeded deuterium or impurity gases are used to increase plasma volumetric power and momentum losses. A real-time feedback control of the gas seeding rate is planned for discharges of up to 5 s duration. The outer divertor leg plasma electron temperature Te estimated spectroscopically in real time will be used as a control parameter. A vacuum ultraviolet spectrometer McPherson Model 251 with a fast charged-coupled device detector is developed for temperature monitoring between 5 and 30 eV, based on the delta n=0;1 line intensity ratios of carbon, nitrogen or neon ions lines in the spectral range 300 to 1600 A. A collisional-radiative model-based line intensity ratio will be used for relative calibration. A real-time Te-dependent signal within a characteristic divertor detachment equilibration time of ~ 10-15 ms is expected.
Type:
Dataset
Issue Date:
November 2016

292. Plasma Facing Components with Capillary Porous System and Liquid Metal Coolant Flow

Author(s):
Khodak, Andrei; Maingi, Rajesh
Abstract:
Liquid metal can create a renewable protective surface on plasma facing components (PFC), with an additional advantage of deuterium pumping and the prospect of tritium extraction if liquid lithium (LL) is used and maintained below 450 C, the temperature above which LL vapor pressure begins to contaminate the plasma. LM can also be utilized as an efficient coolant, driven by the Lorentz force created with the help of the magnetic field in fusion devices. Capillary porous systems can serve as a conduit of LM and simultaneously provide stabilization of the LM flow, protecting against spills into the plasma. Recently a combination of a fast-flowing LM cooling system with a porous plasma facing wall (CPSF) was investigated [Khodak and Maingi (2021)]. The system takes an advantage of a magnetohydrodynamics velocity profile, as well as attractive LM properties to promote efficient heat transfer from the plasma to the LL at low pumping energy cost, relative to the incident heat flux on the PFC. In case of a disruption leading to excessive heat flux from the plasma to the LM PFCs, LL evaporation can stabilize the PFC surface temperature, due to high evaporation heat and apparent vapor shielding. The proposed CPSF was optimized analytically for the conditions of a Fusion Nuclear Science Facility [Kessel et al. (2019)]: 10T toroidal field and 10 MW/m2 peak incident heat flux. Computational fluid dynamics analysis confirmed that a CPSF system with 2.5 mm square channels can pump enough LL so that no additional coolant is needed.
Type:
Dataset and Image
Issue Date:
2021

293. Data for: "Structure and Density of Silicon Carbide to 1.5 TPa and Implications for Extrasolar Planets"

Author(s):
Kim, Donghoon
Abstract:
There has been considerable recent interest in the high-pressure behavior of silicon carbide, a potential major constituent of carbon-rich exoplanets. In this work, the atomic-level structure of SiC was determined through in situ X-ray diffraction under laser-driven ramp compression up to 1.5 TPa; stresses more than seven times greater than previous static and shock data. Here we show that the B1-type structure persists over this stress range and we have constrained its equation of state (EOS). Using this data we have determined the first experimentally based mass-radius curves for a hypothetical pure SiC planet. Interior structure models are constructed for planets consisting of a SiC-rich mantle and iron-rich core. Carbide planets are found to be ~10% less dense than corresponding terrestrial planets.
Type:
Dataset
Issue Date:
28 April 2022

294. Code and data from "Comparative genomic analysis reveals varying levels of mammalian adaptation to coronavirus infections"

Author(s):
King, Sean
Abstract:
Severe acute respiratory coronavirus 2 (SARS-CoV-2), the causative agent of COVID-19, is of zoonotic origin. Evolutionary analyses assessing whether coronaviruses similar to SARS-CoV-2 infected ancestral species of modern-day animal hosts could be useful in identifying additional reservoirs of potentially dangerous coronaviruses. We reasoned that if a clade of species has been repeatedly exposed to a virus, then their proteins relevant for viral entry may exhibit adaptations that affect host susceptibility or response. We perform comparative analyses across the mammalian phylogeny of angiotensin-converting enzyme 2 (ACE2), the cellular receptor for SARS-CoV-2, in order to uncover evidence for selection acting at its binding interface with the SARS-CoV-2 spike protein. We uncover that in rodents there is evidence for adaptive amino acid substitutions at positions comprising the ACE2-spike interaction interface, whereas the variation within ACE2 proteins in primates and some other mammalian clades is not consistent with evolutionary adaptations. We also analyze aminopeptidase N (APN), the receptor for the human coronavirus 229E, a virus that causes the common cold, and find evidence for adaptation in primates. Altogether, our results suggest that the rodent and primate lineages may have had ancient exposures to viruses similar to SARS-CoV-2 and HCoV-229E, respectively. Included in this repository are the instructions and corresponding code required to build the dataset and run the analysis in the manuscript.
Type:
Dataset
Issue Date:
28 September 2021

297. To dee or not to dee: costs and benefits of altering the triangularity of a steady-state DEMO-like reactor

Author(s):
Schwartz, Jacob A.; Nelson, A. O.; Kolemen, Egemen
Abstract:
Shaping a tokamak plasma to have a negative triangularity may allow operation in an ELM-free L-mode regime and with a larger strike-point radius, ameliorating divertor power-handling requirements. However, the shaping has a potential drawback in the form of a lower no-wall ideal beta limit, found using the MHD codes CHEASE and DCON. Using the new fusion systems code FAROES, we construct a steady-state DEMO2 reactor model. This model is essentially zero-dimensional and neglects variations in physical mechanisms like turbulence, confinement, and radiative power limits, which could have a substantial impact on the conclusions deduced herein. Keeping its shape otherwise constant, we alter the triangularity and compute the effects on the levelized cost of energy (LCOE). If the tokamak is limited to a fixed B field, then unless other means to increase performance (such as reduced turbulence, improved current drive efficiency or higher density operation) can be leveraged, a negative-triangularity reactor is strongly disfavored in the model due to lower \beta_N limits at negative triangularity, which leads to tripling of the LCOE. However, if the reactor is constrained by divertor heat fluxes and not by magnet engineering, then a negative-triangularity reactor with higher B0 could be favorable: we find a class of solutions at negative triangularity with lower peak heat flux and lower LCOE than those of the equivalent positive triangularity reactors.
Type:
Dataset
Issue Date:
April 2022

298. Experimental data for paper "hydraulic transmissivity inferred from ice-sheet relaxation following Greenland supraglacial lake drainages"

Author(s):
Lai, Ching-Yao
Abstract:
This setup mimics ice lying above the drainage system. In the experiment, a fluid-filled blister is generated via liquid injection into the interface between a transparent elastic layer and a porous substrate. After injection of liquid, the fluid permeates from the blister through the porous substrate, the blister volume V(t) relaxes exponentially with time. Our lab experiments show that varying the permeability of the porous substrate k significantly impacts the relaxation timescale in the experiments.
Type:
Dataset
Issue Date:
18 May 2021