Search

3. Data and code for “Structured foraging of soil predators unveils functional responses to bacterial defenses”

Author(s):
Gregor, Thomas; Rossine, Fernando
Abstract:
Microscopy images are part of a paper entitled "Structured foraging of soil predators unveils functional responses to bacterial defenses" by Fernando Rossine, Gabriel Vercelli, Corina Tarnita, and Thomas Gregor. For detailed acquisition methods see the paper. Experiments were performed between 2019 and 2020 at Princeton University. Two types of images are provided, macroscopic and microscopic widefiled Images. Macroscopic images all show Petri dishes covered in fluorescent bacteria being consumed by amoebae. Images are shown for D. discoideum, P. violaceum, and A. castellanii. Images depicting drug treatments (Nystatin and Fluorouracil) were obtained using D. discoideum. Images used for the creation of a profile were all taken within 30 minutes of each other. Within each directory numbered images are independent replicates. The raw video directory contains time series for dishes under drug treatments. Each numbered folder is a sequence of photos (taken 30 minutes apart of each other) of a single dish. Microscopic images all show amoebae consuming bacteria on a petri dish. The 45 minute videos show either edge cells (located at the edge of amoebae colonies), or inner cells (located 2.5 millimeters towards the center of the colony, from the edge). Videos are confocal stacks, with bacteria showing in green and amoebae appearing as black holes within the bacterial lawn. As was for the macroscopic images, images are shown for D. discoideum, P. violaceum, and A. castellanii. Images depicting drug treatments (Nystatin and Fluorouracil) were obtained using D. discoideum.
Type:
Dataset and Software
Issue Date:
11 November 2022

4. Data for "Spatial heterogeneity of ammonia fluxes in a deciduous forest and adjacent grassland"

Author(s):
Guo, Xuehui; Pan, Da; Daly, Ryan; Chen, Xi; Walker, John; Tao, Lei; McSpiritt, James; Zondlo, Mark
Abstract:
Gas-phase ammonia (NH3), emitted primarily from agriculture, contributes significantly to reactive nitrogen (Nr) deposition. Excess deposition of Nr to the environment causes acidification, eutrophication, and loss of biodiversity. The exchange of NH3 between land and atmosphere is bidirectional and can be highly heterogenous when underlying vegetation and soil characteristics differ. Direct measurements that assess the spatial heterogeneity of NH3 fluxes are lacking. To this end, we developed and deployed two fast-response, quantum cascade laser-based open-path NH3 sensors to quantify NH3 fluxes at a deciduous forest and an adjacent grassland separated by 700 m in North Carolina, United States from August to November, 2017. The sensors achieved 10 Hz precisions of 0.17 ppbv and 0.23 ppbv in the field, respectively. Eddy covariance calculations showed net deposition of NH3 (-7.3 ng NH3-N m−2 s−1) to the forest canopy and emission (3.2 ng NH3-N m−2 s−1) from the grassland. NH3 fluxes at both locations displayed diurnal patterns with absolute magnitudes largest midday and with smaller peaks in the afternoons. Concurrent biogeochemistry data showed over an order of magnitude higher NH3 emission potentials from green vegetation at the grassland compared to the forest, suggesting a possible explanation for the observed flux differences. Back trajectories originating from the site identified the upwind urban area as the main source region of NH3. Our work highlights the fact that adjacent natural ecosystems sharing the same airshed but different vegetation and biogeochemical conditions may differ remarkably in NH3 exchange. Such heterogeneities should be considered when upscaling point measurements, downscaling modeled fluxes, and evaluating Nr deposition for different natural land use types in the same landscape. Additional in-situ flux measurements accompanied by comprehensive biogeochemical and micrometeorological records over longer periods are needed to fully characterize the temporal variabilities and trends of NH3 fluxes and identify the underlying driving factors.
Type:
Dataset
Issue Date:
September 2022

5. Data for "The value of fusion energy to a decarbonized United States electric grid"

Author(s):
Schwartz, Jacob A.; Ricks, Wilson; Kolemen, Egemen; Jenkins, Jesse D.
Abstract:
Fusion could be a part of future decarbonized electricity systems, but it will need to compete with other technologies. In particular, pulsed tokamaks have a unique operational mode, and evaluating which characteristics make them economically competitive can help select between design pathways. Using a capacity expansion and operations model, we determined cost thresholds for pulsed tokamaks to reach a range of penetration levels in a future decarbonized US Eastern Interconnection. The required capital cost to reach a fusion capacity of 100 GW varied from $3000 to $7200/kW, and the equilibrium penetration increases rapidly with decreasing cost. The value per unit power capacity depends on the variable operational cost and on cost of its competition, particularly fission, much more than on the pulse cycle parameters. These findings can therefore provide initial cost targets for fusion more generally in the United States.
Type:
Dataset
Issue Date:
2022

6. Data for Coarse-grained Intrinsically Disordered Proteins

Author(s):
Webb, Michael; Patel, Roshan; Borca, Carlos
Abstract:
This distribution compiles numerous physical properties for 2,585 intrinsically disordered proteins (IDPs) obtained by coarse-grained molecular dynamics simulation. This combination comprises "Dataset A" as reported in "Featurization strategies for polymer sequence or composition design by machine learning" by Roshan A. Patel, Carlos H. Borca, and Michael A. Webb (DOI: 10.1039/D1ME00160D). The specific IDP sequences are sourced from version 9.0 of the DisProt database. The simulations were performed using the LAMMPS molecular dynamics engine. The interactions used for simulation are obtained from R. M. Regy , J. Thompson , Y. C. Kim and J. Mittal , Improved coarse-grained model for studying sequence dependent phase separation of disordered proteins, Protein Sci., 2021, 1371 —1379.
Type:
Dataset
Issue Date:
6 May 2022

7. Data for “Global adjoint tomography—model GLAD-M25”

Author(s):
Lei, Wenjie
Abstract:
The dataset contains the model file for the Global Adjoint Tomography Model 25 (GLAD-M25). The model file contains parameters defined on the spectral-element mesh and is recommend to be used in SPECFEM3D GLOBE for seismic wave simulation at the global scale.
Type:
Dataset
Issue Date:
5 April 2022

8. Data for: "Structure and Density of Silicon Carbide to 1.5 TPa and Implications for Extrasolar Planets"

Author(s):
Kim, Donghoon
Abstract:
There has been considerable recent interest in the high-pressure behavior of silicon carbide, a potential major constituent of carbon-rich exoplanets. In this work, the atomic-level structure of SiC was determined through in situ X-ray diffraction under laser-driven ramp compression up to 1.5 TPa; stresses more than seven times greater than previous static and shock data. Here we show that the B1-type structure persists over this stress range and we have constrained its equation of state (EOS). Using this data we have determined the first experimentally based mass-radius curves for a hypothetical pure SiC planet. Interior structure models are constructed for planets consisting of a SiC-rich mantle and iron-rich core. Carbide planets are found to be ~10% less dense than corresponding terrestrial planets.
Type:
Dataset
Issue Date:
28 April 2022

9. Data for: "The origin of non-skeletal carbonate mud and implications for global climate"

Author(s):
Geyman, Emily C.; Wu, Ziman; Nadeau, Matthew D.; Edmonsond, Stacey; Turner, Andrew; Purkis, Sam J.; Howes, Bolton; Dyer, Blake; Ahm, Anne-Sofie C.; Yao, Nan; Deutsch, Curtis A.; Higgins, John A.; Stolper, Daniel A.; Maloof, Adam C.
Abstract:
Carbonate mud represents one of the most important geochemical archives for reconstructing ancient climatic, environmental, and evolutionary change from the rock record. Mud also represents a major sink in the global carbon cycle. Yet, there remains no consensus about how and where carbonate mud is formed. In this contribution, we present new geochemical data that bear on this problem, including stable isotope and minor and trace element data from carbonate sources in the modern Bahamas such as ooids, corals, foraminifera, and green algae.
Type:
Dataset
Issue Date:
16 June 2022

10. Data from "Homogeneous ice nucleation in an ab initio machine learning model"

Author(s):
Piaggi, Pablo
Abstract:
This dataset contains input and output files to reproduce the results of the manuscript "Homogeneous ice nucleation in an ab initio machine learning model" by Pablo M. Piaggi, Jack Weis, Athanassios Z. Panagiotopoulos, Pablo G. Debenedetti, and Roberto Car (arXiv preprint https://arxiv.org/abs/2203.01376). In this work, we studied the homogeneous nucleation of ice from supercooled liquid water using a machine learning model trained on ab initio energies and forces. Since nucleation takes place over times much longer than the simulation times that can be afforded using molecular dynamics simulations, we make use of the seeding technique that is based on simulating an ice cluster embedded in liquid water. The key quantity provided by the seeding technique is the size of the critical cluster (i.e., a size such that the cluster has equal probabilities of growing or shrinking at the given supersaturation). Using data from the seeding simulations and the equations of classical nucleation theory we compute nucleation rates that can be compared with experiments.
Type:
Dataset
Issue Date:
4 April 2022

11. Data from "Liquid-liquid transition in water from first principles"

Author(s):
Gartner, Thomas
Abstract:
This dataset contains all data relevant to a forthcoming publication in which we used molecular simulation methods to study the phase behavior of supercooled water. The dataset contains simulation input and output files, processed data files, and image files used to create all plots in the manuscript. Python analysis scripts are also included, including instructions for how to re-generate all plots in the manuscript.
Type:
Dataset
Issue Date:
26 July 2022

12. Data from "Transferability of data-driven, many-body models for CO2 simulations in the vapor and liquid phases"

Author(s):
Yue, Shuwen; Riera, Marc
Abstract:
This dataset comprises of data associated with the publication "Transferability of data-driven, many-body models for CO2 simulations in the vapor and liquid phases", which can be found at https://doi.org/10.1063/5.0080061. The data includes calculations for a Many-Body decomposition, virial coefficient calculations, orientational molecular scan energies, potential energy fields, correlation plots of training and testing data, vapor-liquid equilibrium simulations, liquid density simulations, and solid cell simulations.
Type:
Dataset
Issue Date:
30 March 2022

13. Data on Enzyme Activity Retention in glucose oxidase, lipase, and horseradish peroxidase

Author(s):
Webb, Michael; Patel, Roshan; Gormley, Adam; Tamasi, Matt; Borca, Carlos; Kosuri, Shashank
Abstract:
This distribution contains experimentally measured data for the extent of retained enzyme activity post thermal stressing for three distinct enzymes: glucose oxidase, lipase, and horseradish peroxidase. The data is used to form conclusions and develop machine learning models as reported in the publication "Machine Learning on a Robotic Platform for the Design of Polymer-Protein Hybrids" by Matthew Tamasi, Roshan Patel, Carlos Borca, Shashank Kosuri, Heloise Mugnier, Rahul Upadhya, N. Sanjeeva Murthy, Michael Webb*, and Adam Gormley. Details regarding the experimental protocols are reported in the aforementioned paper but are briefly discussed in the README.
Type:
Dataset
Issue Date:
17 May 2022

16. Design of an arrangement of cubic magnets for a quasi-axisymmetric stellarator experiment

Author(s):
Hammond, Kenneth; Zhu, Caoxiang; Korrigan, Keith; Gates, David; Lown, Robert; Mercurio, Robert; Qian, Tony; Zarnstorff, Michael
Abstract:
The usage of permanent magnets to shape the confining field of a stellarator has the potential to reduce or eliminate the need for non-planar coils. As a proof-of-concept for this idea, we have developed a procedure for designing an array of cubic permanent magnets that works in tandem with a set of toroidal-field coils to confine a stellarator plasma. All of the magnets in the design are constrained to have identical geometry and one of three polarization types in order to simplify fabrication while still producing sufficient field accuracy. We present some of the key steps leading to the design, including the geometric arrangement of the magnets around the device, the procedure for optimizing the polarizations according to three allowable magnet types, and the choice of magnet types to be used. We apply these methods to design an array of rare-Earth permanent magnets that can be paired with a set of planar toroidal-field coils to confine a quasi-axisymmetric plasma with a toroidal magnetic field strength of about 0.5 T on axis.
Type:
Dataset
Issue Date:
2022

17. Effects of collisional ion orbit loss on neoclassical tokamak radial electric fields

Author(s):
Zhu, Hongxuan; Stoltzfus-Dueck, T; Hager, R; Ku, S; Chang, C. S.
Abstract:
Ion orbit loss is considered important for generating the radially inward electric field Er in a tokamak edge plasma. In particular, this effect is emphasized in diverted tokamaks with a magnetic X point. In neoclassical equilibria, Coulomb collisions can scatter ions onto loss orbits and generate a radially outward current, which in steady state is balanced by the radially inward current from viscosity. To quantitatively measure this loss-orbit current in an edge pedestal, an ion-orbit-flux diagnostic has been implemented in the axisymmetric version of the gyrokinetic particle-in-cell code XGC. As the first application of this diagnostic, a neoclassical DIII-D H-mode plasma is studied using gyrokinetic ions and adiabatic electrons. The validity of the diagnostic is demonstrated by studying the collisional relaxation of Er in the core. After this demonstration, the loss-orbit current is numerically measured in the edge pedestal in quasisteady state. In this plasma, it is found that the radial electric force on ions from Er approximately balances the ion radial pressure gradient in the edge pedestal, with the radial force from the plasma flow term being a minor component. The effect of orbit loss on Er is found to be only mild.
Type:
Dataset
Issue Date:
2022

18. Electron Temperature Gradient Driven Transport Model for Tokamak Plasmas

Author(s):
Rafiq, Tariq; Wilson, Christopher; Luo, Lixiang; Weiland, Jan; Schuster, Eugenio; Pankin, Alexei; Guttenfelder, Walter; Kaye, Stan
Abstract:
A new model for electron temperature gradient (ETG) modes is developed as a component of the Multi-Mode anomalous transport module [T. Rafiq \textit{et al.,} Phys Plasmas \textbf{20}, 032506 (2013)] to predict a time dependent electron temperature profile in conventional and low aspect ratio tokamaks. This model is based on two-fluid equations that govern the dynamics of low-frequency short- and long-wavelength electromagnetic toroidal ETG driven drift modes. A low collisionality NSTX discharge is used to scan the plasma parameter dependence on the ETG real frequency, growth rate, and electron thermal diffusivity. Electron thermal transport is discovered in the deep core region where modes are more electromagnetic in nature. Several previously reported gyrokinetic trends are reproduced, including the dependencies of density gradients, magnetic shear, $\beta$ and gradient of $\beta$ $(\betap)$, collisionality, safety factor, and toroidicity, where $\beta$ is the ratio of plasma pressure to the magnetic pressure. The electron heat diffusivity associated with the ETG mode is discovered to be on a scale consistent with the experimental diffusivity determined by power balance analysis.
Type:
Dataset
Issue Date:
30 August 2022

20. Energetic particle optimization of quasi-axisymmetric stellarator equilibria

Author(s):
LeViness, Alexandra; Schmitt, John; Lazerson, Samuel; Bader, Aaron; Faber, Benjamin; Hammond, Kenneth; Gates, David
Abstract:
An important goal of stellarator optimization is to achieve good confinement of energetic particles such as, in the case of a reactor, alphas created by Deuterium-Tritium (D-T) fusion. In this work, a fixed-boundary stellarator equilibrium was re-optimized for energetic particle confinement via a two-step process: first, by minimizing deviations from quasi-axisymmetry (QA) on a single flux surface near the mid-radius, and secondly by maintaining this improved quasi-axisymmetry while minimizing the analytical quantity ΓC , which represents the angle between magnetic flux surfaces and contours of J||, the second adiabatic invariant. This was performed multiple times, resulting in a group of equilibria with significantly reduced energetic particle losses, as evaluated by Monte Carlo simulations of alpha particles in scaled-up versions of the equilibria. This is the first time that energetic particle losses in a QA stellarator have successfully been reduced by optimizing ΓC . The relationship between energetic particle losses and metrics such as QA error (Eqa) and ΓC in this set of equilibria were examined via statistical methods and a nearly linear relationship between volume-averaged ΓC and prompt particle losses was found.
Type:
Dataset
Issue Date:
2022

22. Fusion Pilot Plant performance and the role of a Sustained High Power Density tokamak

Author(s):
Menard, Jonathan; Grierson, Brian; Brown, Tom; Rana, Chirag; Zhai, Yuhu; Poli, Francesca; Maingi, Rajesh; Guttenfelder, Walter; Snyder, Philip
Abstract:
Recent U.S. fusion development strategy reports all recommend that the U.S. should pursue innovative science and technology to enable construction of a Fusion Pilot Plant (FPP) that produces net electricity from fusion at low capital cost. Compact tokamaks have been proposed as a means of potentially reducing the capital cost of a fusion pilot plant. However, compact steady-state tokamak FPPs face the challenge of integrating a high fraction of self-driven current with high core confinement, plasma pressure, and high divertor parallel heat flux. This integration is sufficiently challenging that a dedicated sustained-high-power-density (SHPD) tokamak facility is proposed by the U.S. community as the optimal way to close this integration gap. Performance projections for the steady-state tokamak FPP regime are presented and a preliminary SHPD device with substantial flexibility in lower aspect ratio (A=2-2.5), shaping, and divertor configuration to narrow gaps to a FPP is described.
Type:
Dataset
Issue Date:
January 2022

23. Genetic Algorithm Crystal Optimization in a Chiral Tetramer Model System

Author(s):
Petsev, Nikolai D.; Nikoubashman, Arash; Latinwo, Folarin
Abstract:
Source code for our genetic algorithm optimization investigation of conglomerate and racemic chiral crystals. In this work, we address challenges in determining the stable structures formed by chiral molecules by applying the framework of genetic algorithms to predict the ground state crystal lattices formed by a chiral tetramer model. Using this code, we explore the relative stability and structures of the model’s conglomerate and racemic crystals, and extract a structural phase diagram for the stable Bravais crystal types in the zero-temperature limit.
Type:
Software
Issue Date:
8 August 2022

24. Global gyrokinetic study of shaping effects on electromagnetic modes at NSTX aspect ratio with ad hoc parallel magnetic perturbation effects

Author(s):
Sharma, A. Y.; Cole, M. D. J.; Görler, T.; Chen, Y.; Hatch, D. R.; Guttenfelder, W.; Hager, R.; Sturdevant, B. J.; Ku, S.; Chang, C. S.
Abstract:
Plasma shaping may have a stronger effect on global turbulence in tight-aspect-ratio tokamaks than in conventional-aspect-ratio tokamaks due to the higher toroidicity and more acute poloidal asymmetry in the magnetic field. In addition, previous local gyrokinetic studies have shown that it is necessary to include parallel magnetic field perturbations in order to accurately compute growth rates of electromagnetic modes in tight-aspect-ratio tokamaks. In this work, the effects of elongation and triangularity on global, ion-scale, linear electromagnetic modes are studied at NSTX aspect ratio and high plasma beta using the global gyrokinetic particle-in-cell code XGC. The effects of compressional magnetic perturbations are approximated via a well-known modification to the particle drifts that was developed for flux-tube simulations [N. Joiner et al., Phys. Plasmas 17, 072104 (2010)], without proof of its validity in a global simulation. Magnetic equilibria are re-constructed for each distinct plasma profile that is used. Coulomb collision effects are not considered. Within the limitations imposed by the present study, it is found that linear growth rates of electromagnetic modes (collisionless microtearing modes and kinetic ballooning modes) are significantly reduced by NSTX-like shaping. For example, growth rates of kinetic ballooning modes at high beta are reduced to the level of that of collisionless trapped electron modes.
Type:
Dataset
Issue Date:
2022

25. Gyrokinetic simulations of momentum flux parasitic to free-energy transfer

Author(s):
Stoltzfus-Dueck, T; Hornsby, W A; Grosshauser, S R
Abstract:
Ion Landau damping interacts with a portion of the E×B drift to cause a non-diffusive outward flux of co-current toroidal angular momentum. Quantitative evaluation of this momentum flux requires nonlinear simulations to determine fL, the fraction of fluctuation free energy that passes through ion Landau damping, in fully developed turbulence. Nonlinear gyrokinetic simulations with the GKW code confirm the presence of the systematic symmetry-breaking momentum flux. For simulations with adiabatic electrons, fL scales inversely with the ion temperature gradient, because only the ion curvature drift can transfer free energy to the electrostatic potential. Although kinetic electrons should in principle relax this restriction, the ion Landau damping measured in collisionless kinetic-electron simulations remained at low levels comparable with ion-curvature-drift transfer, except when magnetic shear was strong. A set of simulations scanning the electron pitch-angle scattering rate showed only a weak variation of fL with the electron collisionality. However, collisional-electron simulations with electron temperature greater than ion temperature unambiguously showed electron-curvature-drift transfer supporting ion Landau damping, leading to a corresponding enhancement of the symmetry-breaking momentum flux.
Type:
Dataset
Issue Date:
2022

26. High Reynolds Number Wind Turbine Wake Data

Author(s):
Pique, Alexander
Abstract:
This dataset is affiliated with the publication https://doi.org/10.1007/s00348-022-03455-0. All of the data provided is necessary to reproduce the results with the aforementioned publication. The data in this repository is for the wake of a wind turbine at high Reynolds numbers. The data is mainly used for reproducing the statistics (deficit and variance profiles) and the phase averaged results.
Type:
Dataset
Issue Date:
16 June 2022

27. Identification of a non-axisymmetric mode in laboratory experiments searching for standard magnetorotational instability

Author(s):
Wang, Yin; Gilson, Erik P.; Ebrahimi, Fatima; Goodman, Jeremy; Caspary, Kyle J.; Winarto, Himawan W.; Ji, Hantao
Abstract:
This dataset provides the source data of figures in the main text of the paper "Identification of a non-axisymmetric mode in laboratory experiments searching for standard magnetorotational instability" accepted by Nature Communications.
Type:
Dataset
Issue Date:
2022

28. Initial Results from Boron Powder Injection Experiments in WEST Lower Single Null L-mode Plasmas

Author(s):
Bodner, Grant; Gallo, Alberto; Diallo, Ahmed; Lunsford, Robert; Moreau, Philippe; Nagy, Alex; Pellissier, Francis-Pierre; Guillemaut, Christophe; Gunn, James; Bourdelle, Clarisse; Desgranges, Corinne; Manas, Pierre; Bortolon, Alessandro; Klepper, Christopher; Tsitrone, Emanuelle; Unterberg, Ezekial; Vermare, Laure
Abstract:
Using a recently installed impurity powder dropper (IPD), boron powder (< 150 μm) was injected into lower single null (LSN) L-mode discharges in WEST. IPDs possibly enable real-time wall conditioning of the plasma-facing components and may help to facilitate H-mode access in the full-tungsten environment of WEST. The discharges in this experiment featured Ip = 0.5 MA, BT = 3.7 T, q95 = 4.3, tpulse = 12–30 s, ne,0 ~ 4×1019 m-2, and PLHCD ~ 4.5 MW. Estimates of the deuterium and impurity particle fluxes, derived from a combination of visible spectroscopy measurements and their corresponding S/XB coefficients, showed decreases of ~ 50% in O+, N+, and C+ populations during powder injection and a moderate reduction of these low-Z impurities (~ 50%) and W (~ 10%) in the discharges that followed powder injection. Along with the improved wall conditions, WEST discharges with B powder injection observed improved confinement, as the stored energy WMHD, neutron rate, and electron temperature Te increased significantly (10–25% for WMHD and 60–200% for the neutron rate) at constant input power. These increases in confinement scale up with the powder drop rate and are likely due to the suppression of ion temperature gradient (ITG) turbulence from changes in Zeff and/or modifications to the electron density profile.
Type:
Dataset
Issue Date:
2022

29. Internal Rotation of ELM Filaments on NSTX

Author(s):
Lampert, Mate; Diallo, Ahmed; Zweben, Stewart; Myra, Jim
Abstract:
The data is formatted to text files. A corresponding file is provided for each figure.
Type:
Dataset
Issue Date:
September 2022

32. Molecular Dynamics Trajectories and Analysis Code Demonstrating Liquid-Liquid Criticality in the WAIL Water Model

Author(s):
Weis, Jack
Abstract:
These GROMACS trajectories show the existence of a critical point in deeply supercooled WAIL water. Also included is the code necessary to reproduce the figures in the corresponding paper from these trajectories. From this data the critical temperature, pressure, and density of the model can be found, and critical fluctuations in the deeply supercooled liquid can be directly observed (in a computer-simulation sense).
Type:
Dataset
Issue Date:
13 May 2022

33. Nonlinear growth of magnetic islands by passing fast ions in NSTX

Author(s):
Yang, James; Fredrickson, Eric; Podestà, Mario; Poli, Francesca
Abstract:
The growth of magnetic islands in NSTX is modeled successfully, with the consideration of passing fast ions. It is shown that a good quantitative agreement between simulation and experimental measurement can be achieved when the uncompensated cross-field current induced by passing fast ions is included in the island growth model. The fast ion parameters, along with other equilibrium parameters, are obtained self-consistently using the TRANSP code with the assumptions of the ‘kick’ model (Podestà et al 2017 Plasma Phys. Control. Fusion 59 095008). The results show that fast ions can contribute to overcoming the stabilizing effect of polarization current for magnetic island growth.
Type:
Dataset
Issue Date:
2022

34. Parametric dependencies of resonant layer responses across linear, two-fluid, drift-MHD regimes

Author(s):
Park, Jong-Kyu
Abstract:
Non-axisymmetric magnetic fields arising in a tokamak either by external or internal perturbations can induce complex non-ideal MHD responses in their resonant surfaces while remaining ideally evolved elsewhere. This layer response can be characterized in a linear regime by a single parameter called the inner-layer Delta, which enables outer-layer matching and the prediction of torque balance to non-linear island regimes. Here, we follow strictly one of the most comprehensive analytic treatments including two-fluid and drift MHD effects and keep the fidelity of the formulation by incorporating the numerical method based on the Riccati transformation when quantifying the inner-layer Delta. The proposed scheme reproduces not only the predicted responses in essentially all asymptotic regimes but also with continuous transitions as well as improved accuracies. In particular, the Delta variations across the inertial regimes with viscous or semi-collisional effects have been further resolved, in comparison with additional analytic solutions. The results imply greater shielding of the electromagnetic torque at the layer than what would be expected by earlier work when the viscous or semi-collisional effects can compete against the inertial effects, and also due to the intermediate regulation by kinetic Alfven wave resonances as rotation slows down. These are important features that can alter the nonaxisymmetric plasma responses including the field penetration by external fields or island seeding process in rotating tokamak plasmas.
Type:
Dataset
Issue Date:
26 July 2022

35. Plasma Facing Components with Capillary Porous System and Liquid Metal Coolant Flow

Author(s):
Khodak, Andrei; Maingi, Rajesh
Abstract:
Liquid metal can create a renewable protective surface on plasma facing components (PFC), with an additional advantage of deuterium pumping and the prospect of tritium extraction if liquid lithium (LL) is used and maintained below 450 C, the temperature above which LL vapor pressure begins to contaminate the plasma. LM can also be utilized as an efficient coolant, driven by the Lorentz force created with the help of the magnetic field in fusion devices. Capillary porous systems can serve as a conduit of LM and simultaneously provide stabilization of the LM flow, protecting against spills into the plasma. Recently a combination of a fast-flowing LM cooling system with a porous plasma facing wall (CPSF) was investigated [Khodak and Maingi (2021)]. The system takes an advantage of a magnetohydrodynamics velocity profile, as well as attractive LM properties to promote efficient heat transfer from the plasma to the LL at low pumping energy cost, relative to the incident heat flux on the PFC. In case of a disruption leading to excessive heat flux from the plasma to the LM PFCs, LL evaporation can stabilize the PFC surface temperature, due to high evaporation heat and apparent vapor shielding. The proposed CPSF was optimized analytically for the conditions of a Fusion Nuclear Science Facility [Kessel et al. (2019)]: 10T toroidal field and 10 MW/m2 peak incident heat flux. Computational fluid dynamics analysis confirmed that a CPSF system with 2.5 mm square channels can pump enough LL so that no additional coolant is needed.
Type:
Dataset and Image
Issue Date:
2021

36. Princeton Dynamic Stall Database: Upward ramp-type pitching motions

Author(s):
Kiefer, Janik; Brunner, Claudia E.; Hansen, Martin O. L.; Hultmark, Marcus
Abstract:
This data set contains data of a NACA 0021 airfoil as it undergoes upward ramp-type pitching motions at high Reynolds numbers and low Mach numbers. The parametric study covers a wide range of chord Reynolds numbers, reduced frequencies and pitching geometries characterized by varying mean angle and angle amplitude. The data were acquired in the High Reynolds number Test Facility at Princeton University, which is a closed-loop wind tunnel that can be pressurized up to 23 MPa and allowed for variation of the chord Reynolds number over a range of 5.0 × 10^5 ≤ Re_c ≤ 5.5 × 10^6. Data were acquired using 32 pressure taps along the surface of the airfoil. The data are the phase-averaged results of 150 individual half-cycles for any given test case.
Type:
Dataset
Issue Date:
6 July 2022

37. Shakespeare and Company Project Dataset: Lending Library Books

Author(s):
Kotin, Joshua; Koeser, Rebecca Sutton; Adair, Carl; Aiyer, Priyanka; Alagappan, Serena; Allen, Paige; Bauer, Jean; Browne, Oliver J.; Budak, Nick; Calver, Harriet; Chiossi, Robert; Chow, Jin Yun; Coles, Iliyah; Davis, Ian; Doroudian, Gissoo; Engel, Currie; Gautreau, Violet; Gjaja, Alex; Green, Elspeth; Hart, Isaac; Hicks, Benjamin; Himmelfarb, Samuel; Joelson, Madeleine E.; Karmanov, Fedor; Kelly, Carolyn; Krolewski, Sara; Li, Xinyi; Maag, Ellie; Macksey, Elizabeth; Mahoney, Cate; Mancino, Francesca; McCarthy, Jesse D.; Naydan, Mary; Patch, Yvonne; Root, Sally; Ruehl, Isabel; Thode, Sylvie; Vandermel, Katherine; VanSant, Camey; Wulfman, Clifford E.
Abstract:
This dataset includes information about approximately 6,000 books and other items with bibliographic data as well as summary information about when the item circulated in the Shakespeare and Company lending library and the number of times an item was borrowed or purchased.
Type:
Dataset
Issue Date:
January 2022

38. Shakespeare and Company Project Dataset: Lending Library Events

Author(s):
Kotin, Joshua; Koeser, Rebecca Sutton; Adair, Carl; Aiyer, Priyanka; Alagappan, Serena; Allen, Paige; Bauer, Jean; Browne, Oliver J.; Budak, Nick; Calver, Harriet; Chiossi, Robert; Chow, Jin Yun; Coles, Iliyah; Davis, Ian; Doroudian, Gissoo; Engel, Currie; Gautreau, Violet; Gjaja, Alex; Green, Elspeth; Hart, Isaac; Hicks, Benjamin; Himmelfarb, Samuel; Joelson, Madeleine E.; Karmanov, Fedor; Kelly, Carolyn; Krolewski, Sara; Li, Xinyi; Maag, Ellie; Macksey, Elizabeth; Mahoney, Cate; Mancino, Francesca; McCarthy, Jesse D.; Naydan, Mary; Patch, Yvonne; Root, Sally; Ruehl, Isabel; Thode, Sylvie; Vandermel, Katherine; VanSant, Camey; Wulfman, Clifford E.
Abstract:
The Shakespeare and Company Project: Lending Library Events dataset includes information about approximately 35,000 lending library events including membership activities such as subscriptions, renewals and reimbursements and book-related activities such as borrowing and purchasing. For events related to lending library cards that are available as digital surrogates, IIIF links are provided.
Type:
Dataset
Issue Date:
January 2022

39. Shakespeare and Company Project Dataset: Lending Library Members

Author(s):
Kotin, Joshua; Koeser, Rebecca Sutton; Adair, Carl; Aiyer, Priyanka; Alagappan, Serena; Allen, Paige; Bauer, Jean; Browne, Oliver J.; Budak, Nick; Calver, Harriet; Chiossi, Robert; Chow, Jin Yun; Coles, Iliyah; Davis, Ian; Doroudian, Gissoo; Engel, Currie; Gautreau, Violet; Gjaja, Alex; Green, Elspeth; Hart, Isaac; Hicks, Benjamin; Himmelfarb, Samuel; Joelson, Madeleine E.; Karmanov, Fedor; Kelly, Carolyn; Krolewski, Sara; Li, Xinyi; Maag, Ellie; Macksey, Elizabeth; Mahoney, Cate; Mancino, Francesca; McCarthy, Jesse D.; Naydan, Mary; Patch, Yvonne; Root, Sally; Ruehl, Isabel; Thode, Sylvie; Vandermel, Katherine; VanSant, Camey; Wulfman, Clifford E.
Abstract:
The Shakespeare and Company Project: Lending Library Members dataset includes information about approximately 5,200 members of Sylvia Beach's Shakespeare and Company lending library.
Type:
Dataset
Issue Date:
January 2022

40. Shakespeare and Company Project Dataset: Lending Library Members, Books, Events

Author(s):
Kotin, Joshua; Koeser, Rebecca Sutton; Adair, Carl; Aiyer, Priyanka; Alagappan, Serena; Allen, Paige; Bauer, Jean; Browne, Oliver J.; Budak, Nick; Calver, Harriet; Chiossi, Robert; Chow, Jin Yun; Coles, Iliyah; Davis, Ian; Doroudian, Gissoo; Engel, Currie; Gautreau, Violet; Gjaja, Alex; Green, Elspeth; Hart, Isaac; Hicks, Benjamin; Himmelfarb, Samuel; Joelson, Madeleine E.; Karmanov, Fedor; Kelly, Carolyn; Krolewski, Sara; Li, Xinyi; Maag, Ellie; Macksey, Elizabeth; Mahoney, Cate; Mancino, Francesca; McCarthy, Jesse D.; Naydan, Mary; Patch, Yvonne; Root, Sally; Ruehl, Isabel; Thode, Sylvie; Vandermel, Katherine; VanSant, Camey; Wulfman, Clifford E.
Abstract:
The Shakespeare and Company Project makes three datasets available to download in CSV and JSON formats. The datasets provide information about lending library members; the books that circulated in the lending library; and lending library events, including borrows, purchases, memberships, and renewals. The datasets may be used individually or in combination site URLs are consistent identifiers across all three.
Type:
Dataset
Issue Date:
January 2022

41. Shock Compression of Fluorapatite to 120 GPa: Wave Profile Data

Author(s):
Rucks, Melinda
Abstract:
The item included here is a collection of wave profiles collected and presented in the accompanying paper: Rucks, M. J., Winey, J. M., Toyoda, T., Gupta, Y. M., & Duffy, T. S. (in review). "Shock compression of fluorapatite to 120 GPa" Submitted to Journal of Geophysical Research: Planets.
Type:
Dataset
Issue Date:
19 October 2022

42. Single-crystal X-ray diffraction of fluorapatite to 61 GPa: Structural Data

Author(s):
Rucks, Melinda J.
Abstract:
This dataset includes individual CIF files with the refined structure of fluorapatite under compression to 61 GPa. The structures have been discussed in detail in the accompanying manuscript "Single-crystal X-ray diffraction of fluorapatite to 61 GPa"
Type:
Dataset
Issue Date:
8 April 2022

44. Spike Trains of Retinal Ganglion Cells Viewing a Repeated Natural Movie

Author(s):
Berry II, Michael J.
Abstract:
This archive contains spike trains simultaneously recorded from ganglion cells in the tiger salamander retina with a multi-electrode array while viewing a repeated natural movie clip. These data have been analyzed in previous papers, notably Puchalla et al. Neuron 2005 and Schneidman et al. Nature 2006.
Type:
Dataset
Issue Date:
8 March 2022

45. Streaked Sub-ps-resolution X-ray Line Shapes and Implications for Solid-density Plasma Dynamics

Author(s):
B. Frances Kraus; Gao, Lan; Hill, K. W.; Bitter, M.; Efthimion, P. C.; Hollinger, R.; Wang, Shoujun; Song, Huanyu; Nedbailo, R.; Rocca, J. J.; Mancini, R. C.; MacDonald, M. J.; Beatty, C. B.; Shepherd, R.
Abstract:
A high-resolution x-ray spectrometer was coupled with an ultrafast x-ray streak camera to produce time-resolved line shape spectra measured from hot, solid-density plasmas. A Bragg crystal was placed near a laser-produced plasma to maximize throughput; alignment tolerances were established by raytracing. The streak camera produced single-shot time-resolved spectra, heavily sloped due to photon time-of-flight differences, with sufficient reproducibility to accumulate photon statistics. The images are time-calibrated by the slope of streaked spectra and dewarped to generate spectra emitted at different times defined at the source. The streaked spectra demonstrate the evolution of spectral shoulders and other features on ps timescales, showing the feasibility of plasma parameter measurements on the rapid timescales necessary to study high-energy-density plasmas.
Type:
Dataset
Issue Date:
2022

46. Study of Stark Broadening of Krypton Helium-beta Lines and Estimation of Electron Density and Temperature in NIF Compressed Capsules

Author(s):
Hill, K. W.; Gao, L.; Kraus, B. F.; Bitter, M.; Efthimion, P. C.; Pablant, N. A.; Schneider, M. B.; Thorn, D. B.; Chen, H.; Kauffman, R. L.; Liedahl, D. A.; MacDonald, M. J.; MacPhee, A. G.; Scott, H. A.; Stoupin, S.; Doron, R.; Stambulchik, E.; Maron, Y.; Lahmann, B.
Abstract:
Numerical data used to draw the figures in the manuscript
Type:
Dataset
Issue Date:
6 June 2022

47. Supplement to PhD Dissertation: "Subsurface Computational Modeling and Policy Analysis of Large-Scale Carbon Capture, Utilization, and Storage (2022)"

Author(s):
Tao, Yiheng
Abstract:
This dataset contains supplementary materials for Chapter 4 and Chapter 5 of Yiheng Tao's PhD dissertation (2022). The dissertation’s abstract is provided here: Carbon capture, utilization, and storage (CCUS) mitigates climate change by capturing carbon dioxide (CO2) emissions from large point sources, or CO2 from the ambient air, and subsequently reusing the captured CO2 or injecting it into deep geological formations for long-term and secure storage. Almost all current decarbonization pathways include large-scale CCUS, on the order of a billion tonnes (Gt) of CO2 captured and stored each year globally starting in 2030, yet the actual deployment has lagged far behind (around 0.04 Gt CO2 was captured in 2021). In this dissertation, I contribute to several aspects of largescale deployment of CCUS by (1) developing and applying efficient numerical models to simulate geological CO2 storage and (2) identifying key policies to address the bottlenecks of overall CCUS deployment. This dissertation concerns the United States, China, and the Belt and Road Initiative (BRI) region through research projects that are consistent with each location’s current development stage of CCUS. Chapters 2 and 3 contain computational modeling studies. In Chapter 2, I develop a new series of vertical-equilibrium (VE) models in the dual-continuum modeling framework to simulate CO2 injection and migration in fractured geological formations. Those models are shown to be effective and efficient when properties of the formation allow for the VE assumption. In Chapter 3, I apply a VE model to simulate basin-scale CO2 injection in the Junggar Basin of Northwestern China. The results show that current regional emissions of more than 100 million tonnes of CO2 per year can be stored effectively, thereby confirming the great potential of the Junggar Basin for early CCUS deployment. Chapters 4 and 5 contain policy analyses. In Chapter 4, I propose a dynamic system consisting of new CO2 pipelines and novel Allam-cycle power plants in the Central United States, and examine how government policies, including an extended Section 45Q tax credit, may improve the economic feasibility of this system. Lastly, in Chapter 5, I investigate and quantify CO2 emissions implications of power plant projects associated with the BRI. I also propose a “greenness ratio” to measure the level of environmental sustainability of BRI in the power sector.
Type:
Dataset
Issue Date:
18 May 2022

48. Supplemental material for: Verification, validation, and results of an approximate model for the stress of a Tokamak toroidal field coil at the inboard midplane

Author(s):
Swanson, CPS; Kahn, S; Rana, C; Titus, PH; Brooks, AW; Guttenfelder, W; Zhai, Y; Brown, TG; Menard, JE
Abstract:
This is the supplemental material for the manuscript "Verification, validation, and results of an approximate model for the stress of a Tokamak toroidal field coil at the inboard midplane" submitted to Fusion Engineering and Design. This material includes PDF writeups of the derivations of the axisymmetric extended plane strain model, the elastic properties smearing model, and 20+ MATLAB scripts and functions which implement the model and generate the figures in the paper.
Type:
collection, Dataset, and Software
Issue Date:
2022

50. TIGRESS simulation data

Author(s):
Kim, Chang-Goo; Ostriker, Eve; Gong, Munan; Kim, Jeong-Gyu
Abstract:
We present the public data release of the TIGRESS (Three-phase Interstellar Medium in Galaxies Resolving Evolution with Star Formation and Supernova Feedback) simulations. This release includes simulations representing the solar neighborhood environment at spatial resolutions of 2 and 4 pc. The original magneto-hydrodynamic simulation data is published along with data products from post-processing, including chemistry, CO emission line, and photoionization (HII regions). Data reading and analysis examples are provided in Python.
Type:
Dataset
Issue Date:
6 September 2022

53. Three dimensional archaeocyathide and coral imagery for morphologic analysis

Author(s):
Manzuk, Ryan; Maloof, Adam
Abstract:
In our study, we compare the three dimensional (3D) morphologic characteristics of Earth's first reef-building animals (archaeocyath sponges) with those of modern, photosynthetic corals. Within this repository are the 3D image data products for both groups of animals. The archaeocyath images were produced through serial grinding and imaging with the Grinding, Imaging, and Reconstruction Instrument at Princeton University. The images in this repository are the downsampled data products used in our study, and the full resolution (>2TB) image stacks are available upon request from the author. For the coral image data, the computed tomography (CT) images of all samples are included at full resolution. Also included in this repository are the manual and automated outline coordinates of the archaeocyath and coral branches, which can be directly used for morphological study.
Type:
Dataset, Image, MovingImage, and StillImage
Issue Date:
August 2022

54. To dee or not to dee: costs and benefits of altering the triangularity of a steady-state DEMO-like reactor

Author(s):
Schwartz, Jacob A.; Nelson, A. O.; Kolemen, Egemen
Abstract:
Shaping a tokamak plasma to have a negative triangularity may allow operation in an ELM-free L-mode regime and with a larger strike-point radius, ameliorating divertor power-handling requirements. However, the shaping has a potential drawback in the form of a lower no-wall ideal beta limit, found using the MHD codes CHEASE and DCON. Using the new fusion systems code FAROES, we construct a steady-state DEMO2 reactor model. This model is essentially zero-dimensional and neglects variations in physical mechanisms like turbulence, confinement, and radiative power limits, which could have a substantial impact on the conclusions deduced herein. Keeping its shape otherwise constant, we alter the triangularity and compute the effects on the levelized cost of energy (LCOE). If the tokamak is limited to a fixed B field, then unless other means to increase performance (such as reduced turbulence, improved current drive efficiency or higher density operation) can be leveraged, a negative-triangularity reactor is strongly disfavored in the model due to lower \beta_N limits at negative triangularity, which leads to tripling of the LCOE. However, if the reactor is constrained by divertor heat fluxes and not by magnet engineering, then a negative-triangularity reactor with higher B0 could be favorable: we find a class of solutions at negative triangularity with lower peak heat flux and lower LCOE than those of the equivalent positive triangularity reactors.
Type:
Dataset
Issue Date:
April 2022

55. Wall conditioning and ELM mitigation with boron nitride powder injection in KSTAR

Author(s):
Gilson, Erik; Lee, H; Bortolon, A; Choe, W; Diallo, A; Hong, SH; Lee, HM; Maingi, R; Mansfield, DK; Nagy, A; Park, SH; Song, IW; Song, JI; Yun, SW; Nazikian, R
Abstract:
Results from KSTAR powder injection experiments, in which tens of milligrams of boron nitride (BN) were dropped into low-power H-mode plasmas, show an improvement in wall conditions in subsequent discharges and, in some cases, a reduction or elimination of edge-localized modes (ELMs). Injected powder is distributed by the plasma flow and is deposited on the wall and, over the course of several discharges, was observed to gradually reduce recycling by 33%, and decrease both the ELM amplitude and frequency. This is the first demonstration of the use of BN for ELM mitigation. In all of these experiments, an Impurity Powder Dropper (IPD) was used to introduce precise, controllable amounts of the materials into ELMy H-mode KSTAR discharges. The plasma duration was between 10 s and 15 s, 𝐼𝑝 = 500 kA, 𝐵𝑇 = 1.8 T, 𝑃NBI = 1.6 MW, and 𝑃ECH = 0.6 MW. Plasma densities were between 2 and 3 × 1019 m−3. In all cases, the pre-fill and startup gas-fueling was kept constant, suggesting that the decrease in baseline D𝛼 emission is in fact due to a reduction in recycling. The results presented herein highlight the viability of powder injection for intra-shot and between-shot wall conditioning.
Type:
Dataset
Issue Date:
September 2021

56. bitKlavier Grand Sample Library—Binaural Mic Image

Author(s):
Trueman, Daniel
Abstract:
The bitKlavier Grand consists of sample collections of a new Steinway D grand piano from nine different stereo mic images, with: 16 velocity layers, at every minor 3rd (starting at A0); Hammer release samples; Release resonance samples; Pedal samples. Release packages at 96k/24bit, 88.2k/24bit, 48k/24bit, 44.1k/16bit are available for various applications.
Type:
Dataset and Sound
Issue Date:
24 March 2022

57. bitKlavier Grand Sample Library—Harp Omni Mic Image

Author(s):
Trueman, Daniel
Abstract:
The bitKlavier Grand consists of sample collections of a new Steinway D grand piano from nine different stereo mic images, with: 16 velocity layers, at every minor 3rd (starting at A0); Hammer release samples; Release resonance samples; Pedal samples. Release packages at 96k/24bit, 88.2k/24bit, 48k/24bit, 44.1k/16bit are available for various applications.
Type:
Dataset and Sound
Issue Date:
24 March 2022

58. bitKlavier Grand Sample Library—House ORTF Mic Image

Author(s):
Trueman, Daniel
Abstract:
The bitKlavier Grand consists of sample collections of a new Steinway D grand piano from nine different stereo mic images, with: 16 velocity layers, at every minor 3rd (starting at A0); Hammer release samples; Release resonance samples; Pedal samples. Release packages at 96k/24bit, 88.2k/24bit, 48k/24bit, 44.1k/16bit are available for various applications.
Type:
Dataset and Sound
Issue Date:
24 March 2022

59. bitKlavier Grand Sample Library—House Wide Cardioid Mic Image

Author(s):
Trueman, Daniel
Abstract:
The bitKlavier Grand consists of sample collections of a new Steinway D grand piano from nine different stereo mic images, with: 16 velocity layers, at every minor 3rd (starting at A0); Hammer release samples; Release resonance samples; Pedal samples. Release packages at 96k/24bit, 88.2k/24bit, 48k/24bit, 44.1k/16bit are available for various applications.
Type:
Dataset and Sound
Issue Date:
24 March 2022

60. bitKlavier Grand Sample Library—Lip Cardioid Mic Image

Author(s):
Trueman, Daniel
Abstract:
The bitKlavier Grand consists of sample collections of a new Steinway D grand piano from nine different stereo mic images, with: 16 velocity layers, at every minor 3rd (starting at A0); Hammer release samples; Release resonance samples; Pedal samples. Release packages at 96k/24bit, 88.2k/24bit, 48k/24bit, 44.1k/16bit are available for various applications.
Type:
Dataset and Sound
Issue Date:
24 March 2022

61. bitKlavier Grand Sample Library—Stage Lid ORTF Mic Image

Author(s):
Trueman, Daniel
Abstract:
The bitKlavier Grand consists of sample collections of a new Steinway D grand piano from nine different stereo mic images, with: 16 velocity layers, at every minor 3rd (starting at A0); Hammer release samples; Release resonance samples; Pedal samples. Release packages at 96k/24bit, 88.2k/24bit, 48k/24bit, 44.1k/16bit are available for various applications.
Type:
Dataset and Sound
Issue Date:
24 March 2022

62. bitKlavier Grand Sample Library—Stage Lid Omni Mic Image

Author(s):
Trueman, Daniel
Abstract:
The bitKlavier Grand consists of sample collections of a new Steinway D grand piano from nine different stereo mic images, with: 16 velocity layers, at every minor 3rd (starting at A0); Hammer release samples; Release resonance samples; Pedal samples. Release packages at 96k/24bit, 88.2k/24bit, 48k/24bit, 44.1k/16bit are available for various applications.
Type:
Dataset and Sound
Issue Date:
24 March 2022

63. bitKlavier Grand Sample Library—Tail Omni Mic Image

Author(s):
Trueman, Daniel
Abstract:
The bitKlavier Grand consists of sample collections of a new Steinway D grand piano from nine different stereo mic images, with: 16 velocity layers, at every minor 3rd (starting at A0); Hammer release samples; Release resonance samples; Pedal samples. Release packages at 96k/24bit, 88.2k/24bit, 48k/24bit, 44.1k/16bit are available for various applications.
Type:
Dataset and Sound
Issue Date:
24 March 2022

64. A software package for plasma facing component analysis and design: the Heat flux Engineering Analysis Toolkit (HEAT)

Author(s):
Looby, Tom; Reinke, Matthew; Wingen, Andreas; Menard, Jonathan; Gerhardt, Stefan; Gray, Travis; Donovan, David; Unterberg, Ezekial; Klabacha, Jonathan; Messineo, Mike
Abstract:
The engineering limits of plasma facing components (PFCs) constrain the allowable operational space of tokamaks. Poorly managed heat fluxes that push the PFCs beyond their limits not only degrade core plasma performance via elevated impurities, but can also result in PFC failure due to thermal stresses or melting. Simple axisymmetric assumptions fail to capture the complex interaction between 3D PFC geometry and 2D or 3D plasmas. This results in fusion systems that must either operate with increased risk or reduce PFC loads, potentially through lower core plasma performance, to maintain a nominal safety factor. High precision 3D heat flux predictions are necessary to accurately ascertain the state of a PFC given the evolution of the magnetic equilibrium. A new code, the Heat flux Engineering Analysis Toolkit (HEAT), has been developed to provide high precision 3D predictions and analysis for PFCs. HEAT couples many otherwise disparate computational tools together into a single open source python package. Magnetic equilibrium, engineering CAD, finite volume solvers, scrape off layer plasma physics, visualization, high performace computing, and more, are connected in a single web-based user interface. Linux users may use HEAT without any software prerequisites via an appImage. This manuscript introduces HEAT, discusses the software architecture, presents first HEAT results, and outlines physics modules in development.
Type:
Dataset
Issue Date:
March 2021

65. A thermodynamic phase transition in magnetic reconnection

Author(s):
Jara-Almonte, Jonathan; Hantao, Ji
Abstract:
Data supporting the manuscript "A thermodynamic phase transition in magnetic reconnection" published in Physical Review Letters.
Type:
Dataset
Issue Date:
7 July 2021

66. Alternative energy vehicle deployment coupled with decarbonizing electricity generation amplifies climate, air quality and health co-benefits in China

Author(s):
Peng, Liqun; Liu, Feiqi; Zhou, Mi; Li, Mingwei; Zhang, Qiang; Mauzerall, Denise L.
Abstract:
China is the world's largest carbon emitter and suffers from severe air pollution. About one million deaths in China were attributable to air pollution in 2017. Alternative energy vehicles (AEVs), e.g. electric, hydrogen fuel cell, and natural gas vehicles, can help achieve both carbon emission mitigation and air quality improvement. However, climate, air quality and health co-benefit of AEVs powered by deeply decarbonized electricity generation remain poorly quantified. Here, we conduct a quantitative integrated assessment of the air quality, health, carbon emission mitigation and economic benefits of AEV deployment as the electricity grid decarbonizes in China. We find population-weighted annual PM2.5 and summer O3 concentration can decrease as large as 5.7μgm−3 and 4.9ppb. Annual avoided premature mortalities and years of life lost resulting from improved ambient air pollution can be as large as ~329,000 persons and ~1,611,000 years. We thus show that maximizing climate, air quality and health benefits of AEV deployment in China requires rapid decarbonization of the power system.
Type:
Dataset
Issue Date:
17 June 2021

67. CPCB continuous monitoring air quality data for India, from 2015-2019

Author(s):
Sharma, Disha; Mauzerall, Denise
Abstract:
The dataset is a compilation of real time ground observations of criteria pollutants monitored at the Central Pollution Control Board (CPCB) continuous stations in India, from 2015-2019. Pollutants included are PM2.5, PM10, SO2, NO2 and O3 and are archived at every hour for all stations across India.
Type:
Dataset
Issue Date:
15 October 2021

68. Chiral Tetramer Molecular Model

Author(s):
Petsev, Nikolai D.; Stillinger, Frank H.; Debenedetti, Pablo G.
Abstract:
Source code for our energy-conserving reformulation of the 4-site molecular model for chiral phenomena originally introduced by Latinwo et al. [F. Latinwo, F. H. Stillinger, and P. G. Debenedetti, Molecular Model for Chirality Phenomena, J. Chem. Phys. 145, 154503 (2016)]. The reformulation includes an additional 8-body force that arises from an explicit configuration-dependent term in the potential energy function, resulting in a coarse-grained energy-conserving force field for molecular dynamics simulations of chirality phenomena. In this model, the coarse-grained interaction energy between two tetramers depends on their respective chiralities, and is controlled by a parameter λ, where favors local configurations involving tetramers of opposite chirality, and gives energetic preference to configurations involving tetramers of the same chirality. The source code is for use with the LAMMPS simulation package.
Type:
Software
Issue Date:
3 August 2021

69. Code and data from "Comparative genomic analysis reveals varying levels of mammalian adaptation to coronavirus infections"

Author(s):
King, Sean
Abstract:
Severe acute respiratory coronavirus 2 (SARS-CoV-2), the causative agent of COVID-19, is of zoonotic origin. Evolutionary analyses assessing whether coronaviruses similar to SARS-CoV-2 infected ancestral species of modern-day animal hosts could be useful in identifying additional reservoirs of potentially dangerous coronaviruses. We reasoned that if a clade of species has been repeatedly exposed to a virus, then their proteins relevant for viral entry may exhibit adaptations that affect host susceptibility or response. We perform comparative analyses across the mammalian phylogeny of angiotensin-converting enzyme 2 (ACE2), the cellular receptor for SARS-CoV-2, in order to uncover evidence for selection acting at its binding interface with the SARS-CoV-2 spike protein. We uncover that in rodents there is evidence for adaptive amino acid substitutions at positions comprising the ACE2-spike interaction interface, whereas the variation within ACE2 proteins in primates and some other mammalian clades is not consistent with evolutionary adaptations. We also analyze aminopeptidase N (APN), the receptor for the human coronavirus 229E, a virus that causes the common cold, and find evidence for adaptation in primates. Altogether, our results suggest that the rodent and primate lineages may have had ancient exposures to viruses similar to SARS-CoV-2 and HCoV-229E, respectively. Included in this repository are the instructions and corresponding code required to build the dataset and run the analysis in the manuscript.
Type:
Dataset
Issue Date:
28 September 2021

70. Coupling between Alfven wave and Kelvin-Helmholtz waves in the low latitude boundary layer

Author(s):
Kim, Eun-Hwa; Johnson, Jay; Nykyri, Katariina
Abstract:
The Kelvin-Helmholtz (KH) instability of magnetohydrodynamic surface waves at the low latitude boundary layer is examined using both an eigenfrequency analysis and a time-dependent wave simulation. The analysis includes the effects of sheared flow and Alfven velocity gradient. When the magnetosheath flows are perpendicular to the ambient magnetic field direction, unstable KH waves that propagate obliquely to the sheared flow direction occur at the sheared flow surface when the Alfv\'en Mach number is higher than an instability threshold. Including a shear transition layer between the magnetosphere and magnetosheath leads to secondary KH waves (driven by the sheared flow) that are coupled to the resonant surface Alfven wave. There are remarkable differences between the primary and the secondary KH waves including wave frequency, the growth rate, and the ratio between transverse and the compressional component. The secondary KH wave energy is concentrated near the shear Alfven wave frequency at the magnetosheath with a lower frequency than the primary KH waves. Although the growth rate of the secondary KH waves is lower than the primary KH waves, the threshold condition is lower, so it is expected that these types of waves will dominate at lower Mach number. Because the transverse component of the secondary KH waves is stronger than the primary KH waves, more efficient wave energy transfer from the boundary layer to the inner magnetosphere is also predicted.
Type:
Dataset
Issue Date:
December 2021

71. CrvA and CrvB form a curvature-inducing module sufficient to induce cell shape complexity in Gram-negative bacteria

Author(s):
Martin, Nicholas R; Blackman, Edith; Bratton, Benjamin P; Chase, Katelyn J; Bartlett, Thomas M; Gitai, Zemer
Abstract:
Bacterial species have diverse cell shapes that enable motility, colonization, and virulence. The cell wall defines bacterial shape and is primarily built by two cytoskeleton-guided synthesis machines, the elongasome and the divisome. However, the mechanisms producing complex shapes, like the curved-rod shape of Vibrio cholerae, are incompletely defined. Previous studies have reported that species-specific regulation of cytoskeleton-guided machines enables formation of complex bacterial shapes such as cell curvature and cellular appendages. In contrast, we report that CrvA and CrvB are sufficient to induce complex cell shape autonomously of the cytoskeleton in V. cholerae. The autonomy of the CrvAB module also enables it to induce curvature in the Gram-negative species Escherichia coli, Pseudomonas aeruginosa, Caulobacter crescentus, and Agrobacterium tumefaciens. Using inducible gene expression, quantitative microscopy, and biochemistry we show that CrvA and CrvB circumvent the need for patterning via cytoskeletal elements by regulating each other to form an asymmetrically-localized, periplasmic structure that directly binds to the cell wall. The assembly and disassembly of this periplasmic structure enables dynamic changes in cell shape. Bioinformatics indicate that CrvA and CrvB may have diverged from a single ancestral hybrid protein. Using fusion experiments in V. cholerae, we find that a synthetic CrvA/B hybrid protein is sufficient to induce curvature on its own, but that expression of two distinct proteins, CrvA and CrvB, promotes more rapid curvature induction. We conclude that morphological complexity can arise independently of cell shape specification by the core cytoskeleton-guided synthesis machines.
Type:
Dataset
Issue Date:
2021

72. Data corresponding to our paper on "Chemotactic smoothing of collective migration"

Author(s):
Bhattacharjee, Tapomoy; Amchin, Daniel; Alert, Ricard; Ott, Jenna; Datta, Sujit
Abstract:
Collective migration -- the directed, coordinated motion of many self-propelled agents -- is a fascinating emergent behavior exhibited by active matter that has key functional implications for biological systems. Extensive studies have elucidated the different ways in which this phenomenon may arise. Nevertheless, how collective migration can persist when a population is confronted with perturbations, which inevitably arise in complex settings, is poorly understood. Here, by combining experiments and simulations, we describe a mechanism by which collectively migrating populations smooth out large-scale perturbations in their overall morphology, enabling their constituents to continue to migrate together. We focus on the canonical example of chemotactic migration of Escherichia coli, in which fronts of cells move via directed motion, or chemotaxis, in response to a self-generated nutrient gradient. We identify two distinct modes in which chemotaxis influences the morphology of the population: cells in different locations along a front migrate at different velocities due to spatial variations in (i) the local nutrient gradient and in (ii) the ability of cells to sense and respond to the local nutrient gradient. While the first mode is destabilizing, the second mode is stabilizing and dominates, ultimately driving smoothing of the overall population and enabling continued collective migration. This process is autonomous, arising without any external intervention; instead, it is a population-scale consequence of the manner in which individual cells transduce external signals. Our findings thus provide insights to predict, and potentially control, the collective migration and morphology of cell populations and diverse other forms of active matter.
Type:
Dataset
Issue Date:
24 June 2021

73. Data for "A New Open-path Eddy Covariance Method for N2O and Other Trace Gases that Minimizes Temperature Corrections"

Author(s):
Pan, Da; Gelfand, Ilya; Tao, Lei; Abraha, Michael; Sun, Kang; Guo, Xuehui; Chen, Jiquan; Robertson, G. Philip; Zondlo, Mark A.
Abstract:
This dataset contains spectroscopic simulations, experimental results for the 2202 cm-1 N2O absorption line, and N2O flux measurements shown in "A New Open-path Eddy Covariance Method for N2O and Other Trace Gases that Minimizes Temperature Corrections" by Da Pan, Ilya Gelfand, Lei Tao, Michael Abraha, Kang Sun, Xuehui Guo, Jiquan Chen, G. Philip Robertson, and Mark A. Zondlo. The HITRAN Application Programming Interface (HAPI) with HITRAN 2016 was used for spectroscopic simulations. Experiments were conducted to quantify H2O-broadened half-width at half maximum and validate spectroscopic simulations. N2O flux was measured with both eddy covariance and static chamber methods.
Type:
Dataset
Issue Date:
26 October 2021

74. Data for "Ammonia Dry Deposition in an Alpine Ecosystem Traced to Agricultural Emission Hotpots"

Author(s):
Pan, Da; Benedict, Katherine; Golston, Levi; Wang, Rui; Collett, Jeffrey Jr; Tao, Lei; Sun, Kang; Guo, Xuehui; Ham, Jay; Prenni, Anthony; Schichtel, Bret; Mikoviny, Tomas; Müller, Markus; Wisthaler, Armin; Zondlo, Mark
Abstract:
Elevated reactive nitrogen (Nr) deposition is a concern for alpine ecosystems, and dry NH3 deposition is a key contributor. Understanding how emission hotspots impact downwind ecosystems through dry NH3 deposition provides opportunities for effective mitigation. However, direct NH3 flux measurements with sufficient temporal resolution to quantify such events are rare. Here, we measured NH3 fluxes at Rocky Mountain National Park (RMNP) during two summers and analyzed transport events from upwind agricultural and urban sources in northeastern Colorado. We deployed open-path NH3 sensors on a mobile laboratory and an eddy covariance tower to measure NH3 concentrations and fluxes. Our spatial sampling illustrated an upslope event that transported NH3 emissions from the hotspot to RMNP. Observed NH3 deposition was significantly higher when backtrajectories passed through only the agricultural region (7.9 ng m-2 s-1) versus only the urban area (1.0 ng m-2 s-1) and both urban and agricultural areas (2.7 ng m-2 s-1). Cumulative NH3 fluxes were calculated using observed, bidirectional modeled, and gap-filled fluxes. More than 40% of the total dry NH3 deposition occurred when air masses were traced back to agricultural source regions. More generally, we identified that 10 (25) more national parks in the U.S. are within 100 (200) km of an NH3 hotspot, and more observations are needed to quantify the impacts of these hotspots on dry NH3 depositions in these regions.
Type:
Dataset
Issue Date:
2021

76. Data for 'Environmental Benefits and Household Costs of Clean Heating Options in Northern China'

Author(s):
Zhou, Mi; Peng, Liqun; Zhang, Lin; Mauzerall, Denise L.
Abstract:
This dataset is created for the paper titled 'Environmental Benefits and Household Costs of Clean Heating Options in Northern China' and published on Nature Sustainability. Based on a 2015 regional anthropogenic emission inventory (base case), we propose seven counterfactual scenarios in which all 2015 residential solid fuel heating in northern China switches to one of the following non-district heating options: clean coal with improved stoves (CCIS), natural gas heaters (NGH), resistance heaters (RH), or air-to-air heat pumps (AAHP). This dataset provides the following gridded information for the base case and each clean heating scenario: (1) annual residential heating emissions for PM2.5/NOx/SO2; (2) monthly mean surface PM2.5 concentrations from the WRF-Chem model; (3) annual PM2.5-related premature deaths calculated by the GEMM model; (4) 2015 population in China; (5) mask for provinces in China; (6) longitude and latitude of each grid center.
Type:
Dataset
Issue Date:
22 December 2021

77. Data for: "Financing Carbon Lock-in in Developing Countries: Bilateral Financing for Power Generation Technologies from China, Japan, and the United States"

Author(s):
Chen, Xu; Li, Zhongshu; Gallagher, Kevin P.; Mauzerall, Denise L.
Abstract:
Power sector decarbonization requires a fundamental redirection of global finance from fossil fuel infrastructure towards low carbon technologies. Bilateral finance plays an important role in the global energy transition to non-fossil energy, but an understanding of its impact is limited. Here, for the first time, we compare the influence of overseas finance from the three largest economies – United States, China, and Japan – on power generation development beyond their borders and evaluate the associated long-term CO2 emissions. We construct a new dataset of Japanese and U.S. overseas power generation finance between 2000-2018 by analyzing their national development finance institutions’ press releases and annual reports and tracking their foreign direct investment at the power plant level. Synthesizing this new data with previously developed datasets for China, we find that the three countries’ overseas financing concentrated in fossil fuel power technologies over the studied period. Financing commitments from China, Japan, and the United States facilitated 101 GW, 95 GW, and 47 GW overseas power capacity additions, respectively. The majority of facilitated capacity additions are fossil fuel plants (64% for China, 87% for Japan, and 66% for the United States). Each of the countries’ contributions to non-hydro renewable generation was less than 15% of their facilitated capacity additions. Together, we estimate that overseas fossil fuel power financing through 2018 from these three countries will lock in 24 Gt CO2 emissions by 2060. If climate targets are to be met, replacing bilateral fossil fuel financing with financing of renewable technologies is crucial.
Type:
Dataset
Issue Date:
8 July 2021

78. Data for: 'Facies control on carbonate δ13C on the Great Bahama Bank'

Author(s):
Geyman, Emily C.; Maloof, Adam C.
Abstract:
The carbon isotopic (δ13C) composition of shallow-water carbonates often is interpreted to reflect the δ13C of the global ocean and is used as a proxy for changes in the global carbon cycle. However, local platform processes, in addition to meteoric and marine diagenesis, may decouple carbonate δ13C from that of the global ocean. To shed light on the extent to which changing sediment grain composition may produce δ13C shifts in the stratigraphic record, we present new δ13C measurements of benthic foraminifera, solitary corals, calcifying green algae, ooids, coated grains, and lime mud from the modern Great Bahama Bank (GBB). This survey of a modern carbonate environment reveals δ13C variability comparable to the largest δ13C excursions in the last two billion years of Earth history.
Type:
Dataset
Issue Date:
6 May 2021

79. Data for: 'How is sea level change encoded in carbonate stratigraphy?'

Author(s):
Geyman, Emily C.; Maloof, Adam C.; Dyer, Blake
Abstract:
The history of organismal evolution, seawater chemistry, and paleoclimate is recorded in layers of carbonate sedimentary rock. Meter-scale cyclic stacking patterns in these carbonates often are interpreted as representing sea level change. A reliable sedimentary proxy for eustasy would be profoundly useful for reconstructing paleoclimate, since sea level responds to changes in temperature and ice volume. However, the translation from water depth to carbonate layering has proven difficult, with recent surveys of modern shallow water platforms revealing little correlation between carbonate facies (i.e., grain size, sedimentary bed forms, ecology) and water depth. We train a convolutional neural network with satellite imagery and new field observations from a 3,000 km2 region northwest of Andros Island (Bahamas) to generate a facies map with 5 m resolution. Leveraging a newly-published bathymetry for the same region, we test the hypothesis that one can extract a signal of water depth change, not simply from individual facies, but from sequences of facies transitions analogous to vertically stacked carbonate strata. Our Hidden Markov Model (HMM) can distinguish relative sea level fall from random variability with ∼90% accuracy. Finally, since shallowing-upward patterns can result from local (autogenic) processes in addition to forced mechanisms such as eustasy, we search for statistical tools to diagnose the presence or absence of external forcings on relative sea level. With a new data-driven forward model that simulates how modern facies mosaics evolve to stack strata, we show how different sea level forcings generate characteristic patterns of cycle thicknesses in shallow carbonates, providing a new tool for quantitative reconstruction of ancient sea level conditions from the geologic record.
Type:
Dataset
Issue Date:
1 February 2021

80. Data for: Three-Dimensional Morphometry of Ooids in Oolites: a new tool for more accurate and precise paleoenvironmental interpretation

Author(s):
Howes, Bolton; Mehra, Akshay; Maloof, Adam
Abstract:
The prevalence of ooids in the stratigraphic record, and their association with shallow-water carbonate environments, make ooids an important paleoenvironmental indicator. Recent advances in the theoretical understanding of ooid morphology, along with empirical studies from Turks and Caicos, Great Salt Lake, and The Bahamas, have demonstrated that the morphology of ooids is indicative of depositional environment and hydraulic conditions. To apply this knowledge from modern environments to the stratigraphic record of Earth history, researchers measure the size and shape of lithified ooids on two-dimensional surfaces (i.e., thin sections or polished slabs), often assuming that random 2D slices intersect the nuclei and that the orientation of the ooids is known. Here we demonstrate that these assumptions rarely are true, resulting in errors of up to 35% on metrics like major axis length. We present a method for making 3D reconstructions by serial grinding and imaging, which enables accurate measurement of the morphology of individual ooids within an oolite, as well as the sorting and porosity of a sample. We also provide three case studies that use the morphology of ooids in oolites to extract environmental information. Each case study demonstrates that 2D measurements can be useful if the environmental signal is large relative to the error from 2D measurements. However, 3D measurements substantially improve the accuracy and precision of environmental interpretations. This study focuses on oolites, but errors from 2D measurements are not unique to oolites; this method can be used to extract accurate grain and porosity measurements from any lithified granular sample.
Type:
Dataset
Issue Date:
22 February 2021

81. Data from "Vapor-liquid equilibrium of water with the MB-pol many-body potential"

Author(s):
Muniz, Maria Carolina; Gartner III, Thomas E.; Riera, Marc; Knight, Christopher; Yue, Shuwen; Paesani, Francesco; Panagiotopoulos, Athanassios Z.
Abstract:
This dataset contains all data (including input files, simulation trajectories as well as other data files and analysis scripts) related to the publication "Vapor-liquid equilibrium of water with the MB-pol many-body potential" by Muniz et al. in preparation (2021). In this work, we assessed the performance of the MB-pol many-body potential with respect to water's vapor-liquid equilibrium properties. Through the use of direct coexistence molecular dynamics, we calculated properties such as coexistence densities, surface tension, vapor pressures and enthalpy of vaporization. We found that MB-pol is able to predict these properties in good agreement with experimental data. The results attest to the chemical accuracy of MB-pol and its large range of application across water's phase diagram.
Type:
Dataset
Issue Date:
2021

85. Delivery Gig Worker Interviews on Automation at Work

Author(s):
Enriquez, Diana
Abstract:
These data include 39 structured interview transcripts. Each case is someone who worked at the time for Uber, UberEats, Lyft, and/or Amazon Flex (Amazon’s contractor delivery service). These data were collected between July and September 2019. All but one of the interviews occurred over the phone. My questions are focused on the structure of their gig work jobs and the technology they used at work or expected to use at work in the future. I included a description of the data, the recruitment methods, and the discussion guide in this ReadMe file. 
Type:
Dataset
Issue Date:
21 September 2021

86. Derrida's Margins datasets

Author(s):
Chenoweth, Katie; Baron-Raiffe, Alexander; Sutton Koeser, Rebecca
Abstract:
Derrida’s Margins <derridas-margins.princeton.edu> is a website and online research tool for annotations from the Library of Jacques Derrida, housed at Princeton University Library (PUL) <library.princeton.edu>. Jacques Derrida is one of the major figures of twentieth-century thought, and his library--which bears the traces of decades of close reading--represents a major intellectual archive. This project focused on annotations related to Derrida’s landmark 1967 work De la grammatologie (Of Grammatology).
Type:
Dataset
Issue Date:
15 October 2021

87. Derrida's Margins datasets

Author(s):
Chenoweth, Katie; Koeser, Rebecca Sutton; Altergott, Renée; Baron-Raiffe, Alexander; Bauer, Jean; Budak, Nick; Córdova, Chad; Hancock, Austin; Hicks, Benjamin; McElwee, Kevin; Vettier, Chloé
Abstract:
Derrida’s Margins <derridas-margins.princeton.edu> is a website and online research tool for annotations from the Library of Jacques Derrida, housed at Princeton University Library (PUL) <library.princeton.edu>. Jacques Derrida is one of the major figures of twentieth-century thought, and his library--which bears the traces of decades of close reading--represents a major intellectual archive. This project focused on annotations related to Derrida’s landmark 1967 work De la grammatologie (Of Grammatology).
Type:
Dataset
Issue Date:
29 October 2021

89. Developments on two lithium vapor-box linear test-stand experiments

Author(s):
Schwartz, Jacob A.; Goldston, Robert J.
Abstract:
The lithium vapor-box divertor is a possible fusion power exhaust solution.It uses condensation pumping to create a gradient of vapor density in a divertor slot; this should allow a stable detachment front without active feedback.As initial explorations of the concept, two test stands which take the form of three connected cylindrical stainless steel boxes are being developed: one without plasma at PPPL, to test models of lithium evaporation and flow; and one for the linear plasma device Magnum-PSI (at DIFFER in Eindhoven, The Netherlands) to test the ability of a lithium vapor cloud to induce volumetric detachment and redistribute the plasma power.The first experiment uses boxes with diameters of 6 cm, joined by apertures with diameters of 2.2 cm. Up to 1 g of Li is placed in one box, which is heated to up to 600 degrees C. The Li evaporates, then flows to and condenses in the two other, cooler boxes over several minutes. The quantity of Li transported is assessed by weighing the boxes before and after the heating cycle, and is compared to the quantity predicted to flow for the box at its measured temperature using a Direct Simulation Monte Carlo code, SPARTA. With good experimental conditions, the two values agree to within 15%.The experiment on Magnum-PSI is in the conceptual design stage.The design is assessed by simulations using the code B2.5-Eunomia.They show that when the hydrogen-ion plasma beam, with n_e = 4e20 per cubic meter, T_e = 1.5 eV, and r = 1 cm, is passed through a 16 cm long, 12 Pa, 625 degree C Li vapor cloud, the plasma heat flux and pressure on the target are significantly reduced compared to the case without Li.With the Li present, the plasma is cooled by excitation of Li neutrals followed by radiation until it volumetrically recombines, lowering the heat flux from 3.7 MW/m^2 to 0.13 MW/m^2, and the pressure is reduced by 93%, largely by collisions of hydrogen ions with neutral Li.
Type:
Dataset
Issue Date:
January 2021

90. Dynamics of filaments during the edge-localized mode crash on NSTX

Author(s):
Lampert,Mate; Diallo,Ahmed; Myra,James R.; Zweben, Stewart J.
Abstract:
Edge localized modes (ELMs) are routinely observed in H-mode plasma regimes of the National Spherical Torus Experiment (NSTX). Due to the explosive nature of the instability, only diagnostics with high temporal and spatial resolution could provide a detailed insight into the dynamics associated with the ELMs. Gas-puff imaging (GPI) at NSTX provides 2D measurements of the magnetic field aligned fluctuations (e.g. ELM filaments) in the scrape-off layer and the at the plasma edge with 2.5 us temporal and 10 mm optical resolution.A novel analysis technique was developed to estimate the frame-by-frame velocities and the spatial parameters of the dominant structures associated with the ELMs. The analysis was applied to single ELM events to characterize the ELM crash dynamics, and then extended to a database of 169 ELM events.Statistical analysis was performed in order to find the characterizing dynamics of the ELM crash. The results show that on average an ELM crash consists of a filament with a circular cross-section which is propelled outwards with a characterizing peak radial velocity of ~3.3 km/s. The radial velocity was found to be linearly dependent on the distance of the filament from the separatrix, which has never been seen before. The ELM filament is characterized by propagation in the ion-diamagnetic direction poloidally with a peak velocity of 11.4 km/s. The ELM crash lasts for approximately 100us until the radial propulsion settles back to the pre-ELM level. The experimental findings were compared with analytical theory. Two possible mechanisms were identified for explaining the observations: the curvature interchange model and the current-filament interaction model.
Type:
Dataset
Issue Date:
January 2021

92. Enhancement of edge turbulence concomitant with ELM suppression during boron powder injection in EAST

Author(s):
Sun, Zhen; Maingi, Rajesh; Diallo, Ahmed; Xu, Wei; Qian, Yuzhong; Tritz, Kevin; Ye, Yang; Li, Chenglong; Xu, Zhong; Wang, Yifeng; Kaixuan, Ye; Bortolon, A.; Nagy, Alex; Zhang, Ling; Duan, Yanmin; Lu, Zhiyuan; Wang, Huiqian; Shi, Tonghui; Zhao, Hailin; Gao, Wei; Xu, Jichan; Chen, Ran; Huang, Ming; Zuo, Guizhong; Xu, Guosheng; Gong, Xianzu; Hu, Jiansheng
Abstract:
Data supporting the manuscript "Enhancement of edge turbulence concomitant with ELM suppression during boron powder injection in EAST" published in Plasma of Physics, 2021.
Type:
Dataset and Image
Issue Date:
August 2021

93. Estimated The New York Times paragraph- and article-level sentiment on China topics, and aggregated survey attitude toward China

Author(s):
Huang, Junming; Cook, Gavin; Xie, Yu
Abstract:
Here we publish the data used in paper "Junming Huang, Gavin Cook, and Yu Xie, Large-scale Quantitative Evidence of Media Impact on Public Opinion toward China". This dataset include estimated sentiments on The New York Times on China in eight topics from 1970 to 2019, and a time series of public attitude aggregated from surveys on China.
Type:
Dataset
Issue Date:
July 2021

94. Experimental data for paper "hydraulic transmissivity inferred from ice-sheet relaxation following Greenland supraglacial lake drainages"

Author(s):
Lai, Ching-Yao
Abstract:
This setup mimics ice lying above the drainage system. In the experiment, a fluid-filled blister is generated via liquid injection into the interface between a transparent elastic layer and a porous substrate. After injection of liquid, the fluid permeates from the blister through the porous substrate, the blister volume V(t) relaxes exponentially with time. Our lab experiments show that varying the permeability of the porous substrate k significantly impacts the relaxation timescale in the experiments.
Type:
Dataset
Issue Date:
18 May 2021

95. Hybrid simulations of sub-cyclotron compressional and global Alfven Eigenmode stability in spherical tokamaks

Author(s):
Lestz, J.B.; Belova, E.V.; Gorelenkov, N.N
Abstract:
A comprehensive numerical study has been conducted in order to investigate the stability of beam-driven, sub-cyclotron frequency compressional (CAE) and global (GAE) Alfven Eigenmodes in low aspect ratio plasmas for a wide range of beam parameters. The presence of CAEs and GAEs has previously been linked to anomalous electron temperature profile flattening at high beam power in NSTX experiments, prompting further examination of the conditions for their excitation. Linear simulations are performed with the hybrid MHD-kinetic initial value code HYM in order to capture the general Doppler-shifted cyclotron resonance that drives the modes. Three distinct types of modes are found in simulations -- co-CAEs, cntr-GAEs, and co-GAEs -- with differing spectral and stability properties. The simulations reveal that unstable GAEs are more ubiquitous than unstable CAEs, consistent with experimental observations, as they are excited at lower beam energies and generally have larger growth rates. Local analytic theory is used to explain key features of the simulation results, including the preferential excitation of different modes based on beam injection geometry and the growth rate dependence on the beam injection velocity, critical velocity, and degree of velocity space anisotropy. The background damping rate is inferred from simulations and estimated analytically for relevant sources not present in the simulation model, indicating that co-CAEs are closer to marginal stability than modes driven by the cyclotron resonances.
Type:
Dataset
Issue Date:
March 2021

96. Hyperdiffusion of dust particles in a turbulent tokamak plasma

Author(s):
Nespoli, Federico; Kaganovich, Igor; Autricque, Adrien; Marandet, Yannick; Tamain, Patrick
Abstract:
The effect of plasma turbulence on the trajectories of dust particles is investigated for the first time. The dynamics of dust particles is computed using the ad-hoc developed Dust Injection Simulator code, using a 3D turbulent plasma background computed with the TOKAM3X code. As a result, the evolution of the particle trajectories is governed by the ion drag force, and the shape of the trajectory is set by the Stokes number $St\propto a_d/n_0$, with $a_d$ the dust radius and $n_0$ the density at the separatrix. The plasma turbulence is observed to scatter the dust particles, exhibiting a hyperdiffusive regime in all cases. The amplitude of the turbulent spread of the trajectories $\Delta r^2$ is shown to depend on the ratio $Ku/St$, with $Ku\propto u_{rms}$ the Kubo number and $u_{rms}$ the fluctuation level of the plasma flow. These results are compared with a simple analytical model, predicting $\Delta r^2\propto (Ku/St)^2t^3$, or $\Delta r^2\propto (u_{rms}n_0/a_d)^2t^3$. As the dust is heated by the plasma fluxes, thermionic emission sets the dust charge, originally negative, to slightly positive values. This results in a substantial reduction of the ion drag force through the suppression of its Coulomb scattering component. The dust grain inertia is then no longer negligible, and drives the transition from a hyperdiffusive regime towards a ballistic one.
Type:
Article
Issue Date:
July 2021

97. Impact of edge harmonic oscillations on the divertor heat flux in NSTX

Author(s):
Gan, Kaifu; Gray, Travis; Zweben, Stewart; Eric, Fredrickson; Maingi, Rajesh; Battaglia, Devon; McLean, Adam; Wirth, Brian
Abstract:
All the data was uploaded with .cvs file, we have not uploaded the figure 1 data since it is just photo show field of view of IR and GPI diagnostic.
Type:
Dataset
Issue Date:
6 December 2021

98. Implementation of higher-order velocity mapping between marker particles and grid in the particle-in-cell code XGC

Author(s):
Mollen Albert; Adams Mark F.; Knepley Matthew G.; Hager Robert; Chang C. S.
Abstract:
The global total-f gyrokinetic particle-in-cell code XGC, used to study transport in magnetic fusion plasmas or to couple with a core gyrokinetic code while functioning as an edge gyrokinetic code, implements a 5-dimensional (5D) continuum grid to perform the dissipative operations, such as plasma collisions, or to exchange the particle distribution function information with a core code. To transfer the distribution function between marker particles and a rectangular 2D velocity-space grid, XGC employs a bilinear mapping. The conservation of particle density and momentum is accurate enough in this bilinear operation, but the error in the particle energy conservation can become undesirably large and cause non-negligible numerical heating in a steep edge pedestal. In the present work we update XGC to use a novel mapping technique, based on the calculation of a pseudo-inverse, to exactly preserve moments up to the order of the discretization space. We describe the details of the implementation and we demonstrate the reduced interpolation error for a tokamak test plasma by using 1st- and 2nd-order elements with the pseudo-inverse method and comparing to the bilinear mapping.
Type:
Dataset
Issue Date:
March 2021

99. Initial operation and data processing on a system for real-time evaluation of Thomson scattering signals on the Large Helical Device

Author(s):
Hammond, K. C.; Laggner, F. M.; Diallo, A.; Doskoczynski, S.; Freeman, C.; Funaba, H.; Gates, D.A.; Rozenblat, R.; Tchilinguirian, G.; Xing, Z.; Yamada, I.; Yasuhara, R.; Zimmer, G.; Kolemen, E.
Abstract:
A scalable system for real-time analysis of electron temperature and density based on signals from the Thomson scattering diagnostic, initially developed for and installed on the NSTX-U experiment, was recently adapted for the Large Helical Device (LHD) and operated for the first time during plasma discharges. During its initial operation run, it routinely recorded and processed signals for four spatial points at the laser repetition rate of 30 Hz, well within the system's rated capability for 60 Hz. We present examples of data collected from this initial run and describe subsequent adaptations to the analysis code to improve the fidelity of the temperature calculations.
Type:
Dataset
Issue Date:
2021

100. Integrative Mechanisms of Social Attention

Author(s):
Bio, Branden; Graziano, Michael
Abstract:
Monitoring the attention of others is fundamental to social cognition. Most of the literature on the topic assumes that our social cognitive machinery is tuned specifically to the gaze direction of others as a proxy for attention. This standard assumption reduces attention to an externally visible parameter. Here we show that this assumption is wrong and a deeper, more meaningful representation is involved. We presented subjects with two cues about the attentional state of a face: direction of gaze and emotional expression. We tested whether people relied predominantly on one cue, the other, or both. If the traditional view is correct, then the gaze cue should dominate. Instead, people employed a variety of strategies, some relying on gaze, some on expression, and some on an integration of cues. We also assessed people’s social cognitive ability using two, independent, standard tests. If the traditional view is correct, then social cognitive ability, as assessed by the independent tests, should correlate with the degree to which people successfully use the gaze cue to judge the attention state of the face. Instead, social cognitive ability correlated best with the degree to which people successfully integrated the cues together, instead of with the use of any one specific cue. The results suggest a rethink of a fundamental component of social cognition: monitoring the attention of others involves constructing a deep model that is informed by a combination of cues. Attention is a rich process and monitoring the attention of others involves a similarly rich representation.
Type:
Dataset
Issue Date:
22 July 2021