Issue date: 16 February 2021
Klibaite, Ugne, Kislin, Mikhail, Verpeut, Jessica L., Sun, Xiaoting, Shaevitz, Joshua W., & Wang, Samuel S.-H. (2021). Deep Behavioral Phenotyping Of Mouse Autism Models using Open-Field Behavior [Data set]. Princeton University. https://doi.org/10.34770/bzkz-j672
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Description: Download the DATASET_MMM_README.txt file for a detailed description of this dataset's content
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Description: The primary experimental data are in the jointsCON.mat and centroids_velocities_CON.mat consist of body parts and centroid dynamics information during Open-Field Sessions from 60 male and 20 female C57BL/6, as well as from ASD models: 14 Cntnap2 WT, 15 Cntnap2 HET, 10 Cntnap2 KO, 17 L7-Tsc1 WT, 17 L7-Tsc1 HET and 9 L7-Tsc1 HOM mutant mice.
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# | Filename | Description | Filesize |
---|---|---|---|
1 | DATASET_MMM_README.txt | Description of dataset | 4.35 KB |
2 | GROOM_IDX.mat | metadata for grooming sorting and analysis | 233 KB |
3 | OFTboxinstrustions.docx | Instructions for experimental setup | 17.9 KB |
4 | allC100_8C_CON.mat | behavior classes over time | 10.8 MB |
5 | allC100_CON.mat | behavior clusters over time | 15.8 MB |
6 | centroids_velocities_CON.mat | body centroid dynamics information | 1.53 GB |
7 | info_8con_8b.mat | metadata to sort unsupervised behavior clusters into semi-supervised behavior classes | 731 Bytes |
8 | jointsCON.mat | body parts dynamics information | 4.92 GB |
9 | mouseSkeletonSimple_400.mat | mouse skeleton used with LEAP | 14.1 KB |
10 | partlistforOFT.xlsx | Part list for experimental setup | 15.3 KB |
11 | sampleOFTmovieC57bl6.avi | Example movie of Open-Field session for male C57BL/6 mouse | 366 MB |
12 | statsBy100.mat | stats | 331 KB |
13 | trainingSet_new10.mat | subsampled results of wavelets from full dataset that is used for tSNE and high-dimensional clustering with k-Means to learn representation of the mouse behavior space | 91.9 MB |
14 | vecsVals_subSelect.mat | results of dimensionality reduction of body-part to body-part distances with online-PCA | 130 KB |