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1. Data Files for "Declining Chinese Attitudes toward the United States amid COVID-19"

Author(s):
Xie, Yu; Huang, Junming; He, Yuchen; Yang, Feng; Zhou, Yi; Qian, Yue; Cai, Weicheng; Zhou, Jie
Abstract:
This dataset encompasses three distinct sets of data analyzed in the study, namely the survey data on favorability to the US, the survey data on trust in Americans, and the social media data.
Type:
Dataset
Issue Date:
December 2023

2. QCL Dataset, 10 Layer Structure, Tolerance [-2, +3] A, Electric Field [0,10,150] kV/cm

Author(s):
Hernandez, Andres Correa; Gmachl, Claire F.
Abstract:
This dataset contains 1800 quantum cascade (QC) structures generated by randomly modifying an initial 10-layer design in the tolerance range of -2 to +3 Angstroms at an applied electric field range of 0 to 150 kV/cm (in 10 kV/cm increments). One structure at one electric field is one design, thus there are 27000 unique designs, represented as a row in the dataset. The layer thicknesses (in angstroms) and the electric field are inputs which get evaluated using a Schrödinger solver, ErwinJr2, to identify the laser transition Figure of Merit (fom*), among other reported outputs.
Type:
Dataset
Issue Date:
December 2023

4. Data from "A Neural Network Water Model Based on the MB-pol Many-Body Potential"

Author(s):
Muniz, Maria Carolina
Abstract:
This dataset contains input files, training data and other files related to the machine learning models developed during the work by Muniz et al. In this work, we construct machine learning models based on the MB-pol many-body model. We find that the training set should include cluster configurations as well as liquid phase configurations in order to accurately represent both liquid and VLE properties. The results attest for the ability of machine learning models to accurately represent many-body potentials and provide an efficient avenue for water simulations.
Type:
Dataset
Issue Date:
27 September 2023

5. Drosophila melanogaster Long Timescale Data 2022

Author(s):
McKenze-Smith, Grace C.; Wolf, Scott W.
Abstract:
This dataset contains lifetime recordings and associated postural data and ethograms for 47 male Drosophila melanogaster.
Type:
Dataset and MovingImage
Issue Date:
September 2023

6. Raw Data for GrsA Sub-domain Dynamics

Author(s):
Sun, Xun; Alfermann, Jonas; Li, Hao; Watkins, Maxwell B.; Chen, Yi-Tsao; Chu, Jhih-Wei; Ando, Nozomi
Abstract:
This repository contains the raw photon-by-photon single-molecule FRET (smFRET) trajectories, SAXS data, and MD simulation trajectories, multi-sequence alignment, and gel images for the paper titled "Sub-Domain Dynamics Enables Chemical Chain Reactions in Nonribosomal Peptide Synthetases."
Type:
Dataset
Issue Date:
2 August 2023

7. Large-Eddy Simulation and Statistical Metric Results for Patterned Sea Ice Surfaces

Author(s):
Fogarty, Joseph
Abstract:
Large-eddy simulations were employed over five different sea ice patterns, with a constant ice fraction, to test if the overlying atmospheric boundary layer (ABL) dynamics and thermodynamics differs. The results of these simulations were used to determine that there were differences in vertical heat flux, momentum flux, and horizontal wind speed, and that more surface information is needed to predict the ABL over the sea ice surface. To see what other surface information is needed, twenty-two landscape metrics were calculated over forty-four different maps at differing resolutions, using the FRAGSTATs program. The results of that analysis are available in a .csv file in this dataset.
Type:
Dataset
Issue Date:
August 2023

8. Supplementary spatial data for Available Land for Cellulosic Biofuel Production: A Supply Chain Centered Comparison

Author(s):
O'Neill, Eric; Lark, Tyler; Xie, Yanhua; Basso, Bruno
Abstract:
Collection of the underlying spatially explicit data for Available Land for Cellulosic Biofuel Production: A Supply Chain Centered Comparison. Includes raw biomass yield data and soil carbon sequestration potential data for three types of marginal land for the USA midwest at the field level including field areas. Collection also includes raw land rasters for the three types of marginal land, model parameters for the MILP model used in the study, and results used to generate the figures in the paper.
Type:
Dataset
Issue Date:
28 July 2023

9. Data for "Stability and Kinetics of Iron-Terephthalate MOFs with Diverse Structures in Aqueous Pollutant Degradation"

Author(s):
Sarazen, Michele; Moore, Samuel
Abstract:
Numerical data is tabulated for all plots (Figures 2, 3a-b, 4-89, S1, S4a-b,d, S5a-b,d, S6-S156) and included as separate spreadsheets categorized by figure in a .zip file in the Supplementary Material. Error bars in Figure 4 show the spread of data observed for 4 and 5 trials on independent samples for MIL-101 and MOF-235, respectively. Figure 6a shows the average of triplicate filtrate test conversions with error propagated based on this spread. Figures 6b and S165 error bars on rate constants are determined based on propagated conversion uncertainty for independent trials and extracted standard deviations of pseudo-first order rate constants from linearized plots. Error bars on other plots represent propagation of experimental uncertainty on single trials.
Type:
Dataset
Issue Date:
19 June 2023

10. Data for: Persistent hepatitis B virus and HIV coinfections in dually humanized mice engrafted with human liver and immune system

Author(s):
Ploss, Alexander; Hogan, Glenn; Winer, Benjamin; Ahodantin, James; Sellau, Julie; Huang, Tiffany; Douam, Florian; Funaki, Masaya; Chiriboga, Luis; Su, Lishan
Abstract:
Chronic hepatitis B (CHB), caused by hepatitis B virus (HBV), remains a major medical problem. HBV has a high propensity for progressing to chronicity and can result in severe liver disease, including fibrosis, cirrhosis and hepatocellular carcinoma. CHB patients frequently present with viral coinfection, including HIV and hepatitis delta virus. About 10% of chronic HIV carriers are also persistently infected with HBV which can result in more exacerbated liver disease. Mechanistic studies of HBV-induced immune responses and pathogenesis, which could be significantly influenced by HIV infection, have been hampered by the scarcity of immunocompetent animal models. Here, we demonstrate that humanized mice dually engrafted with components of a human immune system and a human liver supported HBV infection, which was partially controlled by human immune cells, as evidenced by lower levels of serum viremia and HBV replication intermediates in the liver. HBV infection resulted in priming and expansion of human HLA-restricted CD8+ T cells, which acquired an activated phenotype. Notably, our dually humanized mice support persistent coinfections with HBV and HIV which opens opportunities for analyzing immune dysregulation during HBV and HIV coinfection and preclinical testing of novel immunotherapeutics.
Type:
Dataset
Issue Date:
12 June 2023